C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: emerin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088313 Emd-002 ENSMUSG00000001964 10090 + X:74254830-74261548 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverENSMUST00000088313
Transcript ID Adrenal Colon Liver
ENSMUST00000088313 5.059±0.00 5.330±0.00 2.282±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L9 CIL_0001L9_0002 CGP X:74223461-74261548

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005637 TAS nuclear inner membrane
GO:0005652 TAS nuclear lamina
GO:0035914 IGI skeletal muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310837 EIF1-003 processed_transcript Homo_sapiens 0 512
ENST00000421436 EIF1P1-001 processed_pseudogene Homo_sapiens 0 374
ENST00000423841 EIF1P3-001 processed_pseudogene Homo_sapiens 0 448
ENST00000428233 EIF1P2-001 processed_pseudogene Homo_sapiens 0 259
ENST00000462917 EIF1-002 retained_intron Homo_sapiens 0 514
ENST00000469257 EIF1-001 protein_coding Homo_sapiens 0 953
ENST00000469308 EIF1-005 processed_transcript Homo_sapiens 0 780
ENST00000482111 EIF1-004 retained_intron Homo_sapiens 0 514
ENST00000487533 EIF1P7-001 processed_pseudogene Homo_sapiens 0 425
ENST00000572664 EIF1P4-001 processed_pseudogene Homo_sapiens 0 346
ENST00000585002 EIF1P5-001 unprocessed_pseudogene Homo_sapiens 2e-23 111
ENST00000586699 EIF1-009 protein_coding Homo_sapiens 0 228
ENST00000591776 EIF1-010 protein_coding Homo_sapiens 0 673
ENST00000600054 EIF1P6-001 unprocessed_pseudogene Homo_sapiens 0 350

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