C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000604278 RP11-124D2.7-001 ENSG00000270433 9606 + 14:23294604-23295798 transcribed_unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0001 VISTA 14:23078458-23681621
CIL_0009BW CIL_0009BW_0001 VISTA 14:23137378-23739005
CIL_0008Q4 CIL_0008Q4_0001 VISTA 14:23138150-23738498
CIL_0008QH CIL_0008QH_0001 VISTA 14:23142404-23743714
CIL_0003LT CIL_0003LT_0001 CGP 14:23272422-23302848

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161308 H3f3a-001 protein_coding Mus_musculus 0 597
ENSMUST00000081026 H3f3a-006 protein_coding Mus_musculus 0 579
ENSMUST00000119546 H3f3a-ps1-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000119544 H3f3a-ps2-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000179671 Gm10257-201 processed_pseudogene Mus_musculus 0 355
ENSMUST00000119560 Gm12657-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000116640 Gm14807-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000121683 Gm12950-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000179566 Gm6132-201 processed_pseudogene Mus_musculus 0 289
ENSMUST00000183321 Gm26980-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000186232 RP23-128A11.4-001 processed_pseudogene Mus_musculus 0 196

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