C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 26980
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183321 Gm26980-001 ENSMUSG00000098043 10090 + 16:22236921-22237315 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000183321
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000183321 0.141±0.00 0.035±0.00 0.101±0.04 0.506±0.15 0.467±0.00 0.139±0.01 0.168±0.10 0.308±0.00 0.399±0.16 0.198±0.09 0.380±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0002 VISTA 16:21809929-22410861
CIL_0003YC CIL_0003YC_0003 CGP 16:22059009-22266005

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 512
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 501
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 529
ENST00000366814 H3F3A-003 protein_coding Homo_sapiens 0 363
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 529
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 529
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 529
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 407
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 490
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 436
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 0 366
ENST00000427081 RP4-631H13.5-001 processed_pseudogene Homo_sapiens 0 353
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 505
ENST00000475267 H3F3AP5-001 processed_pseudogene Homo_sapiens 0 468
ENST00000497682 H3F3AP3-001 processed_pseudogene Homo_sapiens 0 462
ENST00000532005 RP11-745I13.1-001 processed_pseudogene Homo_sapiens 0 195
ENST00000547971 RP11-98E6.1-001 processed_pseudogene Homo_sapiens 8.96831e-44 180
ENST00000559063 CTD-2651B20.2-001 processed_pseudogene Homo_sapiens 0 387
ENST00000604278 RP11-124D2.7-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 263
ENST00000604456 RP11-124D2.7-002 processed_transcript Homo_sapiens 0 283

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