C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6132
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179566 Gm6132-201 ENSMUSG00000095343 10090 - 13:70007204-70007614 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverOvaryPlacentaTestisENSMUST00000179566
Transcript ID Bladder Brain Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000179566 0.081±0.01 0.029±0.00 0.125±0.00 0.122±0.00 0.107±0.05 0.227±0.00 0.313±0.40 0.273±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 571
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 556
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 582
ENST00000366814 H3F3A-003 protein_coding Homo_sapiens 0 412
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 582
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 582
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 582
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 453
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 525
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 501
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 0 409
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 534
ENST00000443015 AC133141.1-001 processed_pseudogene Homo_sapiens 0 322
ENST00000444762 RP11-337A23.5-001 processed_pseudogene Homo_sapiens 0 385
ENST00000453859 AC019080.1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000475267 H3F3AP5-001 processed_pseudogene Homo_sapiens 0 512
ENST00000496255 RP11-473P24.2-001 processed_pseudogene Homo_sapiens 0 407
ENST00000497682 H3F3AP3-001 processed_pseudogene Homo_sapiens 0 490
ENST00000505098 CTC-505O3.1-001 processed_pseudogene Homo_sapiens 0 472
ENST00000509149 CTC-470C15.1-001 processed_pseudogene Homo_sapiens 0 268
ENST00000532005 RP11-745I13.1-001 processed_pseudogene Homo_sapiens 0 237
ENST00000547971 RP11-98E6.1-001 processed_pseudogene Homo_sapiens 0 252
ENST00000557753 RP11-452K20.1-001 processed_pseudogene Homo_sapiens 0 339
ENST00000559063 CTD-2651B20.2-001 processed_pseudogene Homo_sapiens 0 420
ENST00000559984 H3F3AP1-001 processed_pseudogene Homo_sapiens 0 320
ENST00000603240 RP11-27M5.1-001 processed_pseudogene Homo_sapiens 3e-33 145
ENST00000604179 RP11-3K24.2-001 processed_pseudogene Homo_sapiens 0 219
ENST00000604278 RP11-124D2.7-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 289
ENST00000604456 RP11-124D2.7-002 processed_transcript Homo_sapiens 0 320
ENST00000619270 CTD-2062A1.2-001 processed_pseudogene Homo_sapiens 0 255

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