C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000605239 AP000436.4-001 ENSG00000270775 9606 - 11:65025390-65026515 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryTestisENST00000605239
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000605239 0.182±0.00 0.019±0.00 0.080±0.00 0.180±0.00 0.051±0.00 0.019±0.00 0.017±0.00 0.018±0.00 0.049±0.00 0.078±0.00 0.092±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 651
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 573
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 573
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 477
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 425
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 411

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