C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ryanodine receptor 2 (cardiac)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000609119 RYR2-006 ENSG00000198626 9606 + 1:237674764-237786036 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000609119
Transcript ID Adrenal Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000609119 0.272±0.00 0.075±0.00 0.287±0.00 78.892±0.00 0.019±0.00 0.009±0.00 0.132±0.00 0.288±0.00 0.479±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IY CIL_0008IY_0001 VISTA 1:236697312-237300217
CIL_0008J9 CIL_0008J9_0001 VISTA 1:236711218-237313545
CIL_0008J8 CIL_0008J8_0001 VISTA 1:236729167-237332656

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170156 Ryr2-202 protein_coding Mus_musculus 0 2228
ENSMUST00000021750 Ryr2-201 protein_coding Mus_musculus 0 2228
ENSDART00000149737 ryr2b-001 protein_coding Danio_rerio 0 832

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