C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC-like kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611575 CLK4-201 ENSG00000113240 9606 - 5:178603589-178627001 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000611575
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000611575 5.170±0.00 3.777±0.00 3.329±0.00 2.004±0.00 2.097±1.15 3.126±0.00 3.856±1.60 2.834±0.54 0.881±0.34 9.718±5.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XD CIL_0000XD_0002 CGP 5:178237618-178630615

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093132 Clk4-001 protein_coding Mus_musculus 0 1332
ENSMUST00000109111 Clk4-004 protein_coding Mus_musculus 0 645
ENSMUST00000109113 Clk4-003 protein_coding Mus_musculus 0 645
ENSMUST00000130641 Clk4-005 protein_coding Mus_musculus 0 532
ENSMUST00000136587 Clk4-009 retained_intron Mus_musculus 0 520
ENSMUST00000148467 Clk4-014 retained_intron Mus_musculus 0 499
ENSMUST00000034868 Clk1-001 protein_coding Mus_musculus 0 448
ENSMUST00000186552 Clk1-013 retained_intron Mus_musculus 0 433
ENSMUST00000140628 Clk4-012 retained_intron Mus_musculus 0 409
ENSMUST00000147007 Clk4-011 retained_intron Mus_musculus 0 294
ENSMUST00000146776 Clk4-008 retained_intron Mus_musculus 0 268
ENSMUST00000148053 Clk4-007 nonsense_mediated_decay Mus_musculus 0 268
ENSMUST00000133200 Clk4-010 retained_intron Mus_musculus 0 268
ENSMUST00000126131 Clk4-006 nonsense_mediated_decay Mus_musculus 0 268
ENSMUST00000129577 Clk1-003 retained_intron Mus_musculus 2e-30 137
ENSMUST00000156931 Clk1-002 retained_intron Mus_musculus 2e-30 137

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