C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC like kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093132 Clk4-001 ENSMUSG00000020385 10090 + 11:51263114-51281764 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093132
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093132 4.864±0.00 2.750±0.70 10.694±0.64 9.838±1.13 4.737±0.45 2.085±0.48 3.500±0.76 4.226±0.79 7.888±4.32 6.039±1.11 7.999±1.39 6.199±3.82 9.886±2.88 18.154±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004712 IEA protein serine/threonine/tyrosine kinase activity
GO:0004713 IDA protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0018108 IDA peptidyl-tyrosine phosphorylation
GO:0043484 IEA regulation of RNA splicing
GO:0046777 IDA protein autophosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316308 CLK4-001 protein_coding Homo_sapiens 0 2333
ENST00000321356 CLK1-001 protein_coding Homo_sapiens 0 750
ENST00000409403 CLK1-006 nonsense_mediated_decay Homo_sapiens 0 516
ENST00000434813 CLK1-007 protein_coding Homo_sapiens 0 750
ENST00000461981 CLK1-002 retained_intron Homo_sapiens 6e-30 137
ENST00000473565 CLK1-004 retained_intron Homo_sapiens 6e-30 137
ENST00000519132 CLK4-008 retained_intron Homo_sapiens 0 798
ENST00000519583 CLK4-013 retained_intron Homo_sapiens 0 1587
ENST00000520126 CLK4-007 retained_intron Homo_sapiens 0 558
ENST00000520199 CLK4-006 retained_intron Homo_sapiens 0 728
ENST00000520878 CLK4-005 retained_intron Homo_sapiens 0 1757
ENST00000520957 CLK4-012 protein_coding Homo_sapiens 0 287
ENST00000521621 CLK4-003 nonsense_mediated_decay Homo_sapiens 0 2008
ENST00000522136 CLK4-009 nonsense_mediated_decay Homo_sapiens 0 926
ENST00000522556 CLK4-004 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000522749 CLK4-011 processed_transcript Homo_sapiens 2e-23 113
ENST00000611575 CLK4-201 protein_coding Homo_sapiens 0 1332
ENST00000611733 CLK4-202 protein_coding Homo_sapiens 0 1365

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