C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC-like kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129577 Clk1-003 ENSMUSG00000026034 10090 - 1:58416143-58424066 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129577
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129577 6.680±0.62 4.330±0.83 26.920±14.02 10.635±7.51 9.289±2.71 7.104±0.85 4.799±0.00 4.993±1.25 9.919±6.38 13.008±3.68 2.715±0.00 10.835±5.85 5.927±1.07 2.567±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AX CIL_0002AX_0002 CGP 1:58392898-58424066
CIL_0002AY CIL_0002AY_0002 CGP 1:58410189-58445486

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316308 CLK4-001 protein_coding Homo_sapiens 4e-30 137
ENST00000321356 CLK1-001 protein_coding Homo_sapiens 0 263
ENST00000409403 CLK1-006 nonsense_mediated_decay Homo_sapiens 0 263
ENST00000409769 CLK1-005 protein_coding Homo_sapiens 2e-40 171
ENST00000432425 CLK1-003 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000434813 CLK1-007 protein_coding Homo_sapiens 0 263
ENST00000461981 CLK1-002 retained_intron Homo_sapiens 0 1059
ENST00000473565 CLK1-004 retained_intron Homo_sapiens 0 1059
ENST00000519132 CLK4-008 retained_intron Homo_sapiens 7e-24 117
ENST00000519583 CLK4-013 retained_intron Homo_sapiens 0 460
ENST00000520199 CLK4-006 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000520878 CLK4-005 retained_intron Homo_sapiens 0 411
ENST00000521621 CLK4-003 nonsense_mediated_decay Homo_sapiens 5e-30 137
ENST00000611575 CLK4-201 protein_coding Homo_sapiens 2e-30 137
ENST00000611733 CLK4-202 protein_coding Homo_sapiens 4e-30 137
ENST00000621181 CLK1-201 protein_coding Homo_sapiens 0 265

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