C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC-like kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186552 Clk1-013 ENSMUSG00000026034 10090 - 1:58414590-58420398 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000186552
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000186552 8.644±1.22 51.388±0.00 144.163±60.29 63.661±22.51 23.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AX CIL_0002AX_0002 CGP 1:58392898-58424066
CIL_0002AY CIL_0002AY_0002 CGP 1:58410189-58445486

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316308 CLK4-001 protein_coding Homo_sapiens 0 433
ENST00000321356 CLK1-001 protein_coding Homo_sapiens 0 754
ENST00000409403 CLK1-006 nonsense_mediated_decay Homo_sapiens 0 754
ENST00000409769 CLK1-005 protein_coding Homo_sapiens 0 503
ENST00000432425 CLK1-003 nonsense_mediated_decay Homo_sapiens 0 595
ENST00000434813 CLK1-007 protein_coding Homo_sapiens 0 754
ENST00000461981 CLK1-002 retained_intron Homo_sapiens 0 457
ENST00000473565 CLK1-004 retained_intron Homo_sapiens 0 595
ENST00000519583 CLK4-013 retained_intron Homo_sapiens 0 324
ENST00000520199 CLK4-006 retained_intron Homo_sapiens 1e-30 137
ENST00000520878 CLK4-005 retained_intron Homo_sapiens 0 619
ENST00000521621 CLK4-003 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000611575 CLK4-201 protein_coding Homo_sapiens 0 433
ENST00000611733 CLK4-202 protein_coding Homo_sapiens 0 433
ENST00000621181 CLK1-201 protein_coding Homo_sapiens 0 595

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