C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhomboid domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614848 RHBDD2-203 ENSG00000005486 9606 + 7:75878948-75888920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000614848
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000614848 14.327±0.00 12.979±0.00 65.801±0.00 13.772±0.00 10.019±0.00 2.825±2.71 14.652±14.50 23.122±0.00 16.923±16.36 15.838±0.00 18.589±8.02 20.658±2.01 8.241±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NQ CIL_0006NQ_0001 CGP 7:75811665-75888926
CIL_0006NP CIL_0006NP_0001 CGP 7:75842602-75986855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043707 Rhbdd2-001 protein_coding Mus_musculus 0 1133
ENSMUST00000136748 Rhbdd2-002 nonsense_mediated_decay Mus_musculus 0 917
ENSMUST00000084599 Rhbdd2-003 retained_intron Mus_musculus 0 470

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