C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616756 RP11-174N3.4-001 ENSG00000273870 9606 - 6:35070871-35071049 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartOvaryPlacentaENST00000616756
Transcript ID Adipose Adrenal Brain Heart Ovary Placenta
ENST00000616756 0.093±0.00 0.190±0.00 0.294±0.00 0.195±0.00 1.856±1.47 1.291±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EV CIL_0002EV_0001 CGP 6:34877778-35091413
CIL_0002EU CIL_0002EU_0001 CGP 6:34889265-35148610

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117447 Rps12-ps10-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000139165 Rps12-ps9-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000183090 Rps12l1-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000073926 Rps12-201 protein_coding Mus_musculus 0 226
ENSMUST00000086764 Rps12-ps3-201 protein_coding Mus_musculus 0 226
ENSMUST00000119773 Rps12-ps19-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000121980 Rps12-ps1-001 processed_pseudogene Mus_musculus 0 187
ENSMUST00000117751 Rps12-ps26-001 processed_pseudogene Mus_musculus 4.06377e-44 180
ENSMUST00000118272 Rps12-ps5-001 processed_pseudogene Mus_musculus 6.99949e-42 172

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