C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease P/MRP 40kDa subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618533 RPP40-201 ENSG00000124787 9606 - 6:4995049-5004063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000618533
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000618533 0.518±0.00 1.334±0.00 0.448±0.08 0.792±0.18 0.665±0.00 0.333±0.18 0.591±0.00 1.375±0.00 0.551±0.06 0.557±0.47 1.882±1.27 1.429±0.45 2.120±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000162 CIL_000162_0002 CGP 6:4706159-5004063
CIL_0003SE CIL_0003SE_0001 CGP 6:4994732-5089487

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174230 Rpp40-002 protein_coding Mus_musculus 0 490
ENSMUST00000174852 Rpp40-003 retained_intron Mus_musculus 0 490
ENSMUST00000171686 Rpp40-001 protein_coding Mus_musculus 0 490
ENSMUST00000174231 Rpp40-004 protein_coding Mus_musculus 0 206

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