C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sperm specific antigen 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138434 SSFA2 9606 + 2:181891833-181930738 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320370 SSFA2-002 181891955-181930738 protein_coding
  ENST00000409001 SSFA2-004 181891985-181930738 protein_coding
  ENST00000409136 SSFA2-009 181910505-181930738 protein_coding
  ENST00000416081 SSFA2-007 181893393-181930738 nonsense_mediated_decay
  ENST00000431877 SSFA2-001 181891888-181930738 protein_coding
  ENST00000440623 SSFA2-006 181892196-181930738 nonsense_mediated_decay
  ENST00000451836 SSFA2-017 181920606-181929797 protein_coding
  ENST00000454579 SSFA2-005 181892196-181929784 nonsense_mediated_decay
  ENST00000467172 SSFA2-013 181918861-181929677 processed_transcript
  ENST00000470129 SSFA2-011 181892632-181893850 processed_transcript
  ENST00000470654 SSFA2-015 181898859-181901974 retained_intron
  ENST00000480753 SSFA2-003 181891833-181894695 retained_intron
  ENST00000491720 SSFA2-008 181900861-181930738 retained_intron
  ENST00000491866 SSFA2-012 181916722-181919375 processed_transcript
  ENST00000495248 SSFA2-014 181892353-181898919 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409001ENST00000409136ENST00000431877ENST00000440623ENST00000451836ENST00000454579ENST00000467172ENST00000480753ENST00000491720
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409001 7.066±0.00 8.066±0.00 1.587±0.00 4.370±0.00 6.440±3.14 N/A 4.134±0.00 5.508±0.00 3.632±0.00 11.587±4.42 0.914±0.00 8.175±4.37 5.582±1.87 10.628±0.49
ENST00000409136 N/A N/A N/A N/A 4.750±0.00 5.198±0.00 N/A 5.293±0.00 6.336±0.00 12.588±0.00 N/A 12.729±0.00 3.820±0.95 9.683±0.00
ENST00000431877 5.372±0.00 N/A N/A 4.918±2.05 N/A 10.428±0.00 2.000±0.00 5.452±2.48 1.763±0.00 7.688±0.00 1.139±0.62 3.700±0.00 5.024±1.24 3.272±0.00
ENST00000440623 N/A N/A N/A N/A N/A N/A 2.463±0.00 N/A N/A N/A 0.794±0.13 N/A N/A N/A
ENST00000451836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.271±0.00 N/A
ENST00000454579 N/A N/A N/A 5.152±0.00 2.799±0.00 N/A 1.011±0.00 5.820±0.00 N/A N/A 1.765±0.00 19.934±0.00 N/A 6.813±0.00
ENST00000467172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 69.309±0.00 23.010±0.00 40.737±0.00
ENST00000480753 N/A N/A 4.695±0.00 6.053±0.00 N/A 10.656±0.00 2.883±0.00 N/A 4.382±0.00 13.696±0.00 1.515±0.00 41.273±0.00 N/A N/A
ENST00000491720 N/A 2.283±0.00 1.388±0.00 N/A 1.763±0.00 4.274±0.00 N/A 2.204±0.00 1.404±0.00 3.621±0.00 N/A 2.372±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Y CIL_00080Y_0001 VISTA 2:181386314-181987082
CIL_0004BY CIL_0004BY_0002 CGP 2:181673088-181930738
CIL_0004BV CIL_0004BV_0002 CGP 2:181891833-182131398

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005102 IEA receptor binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038938 ssfa2 sperm specific antigen 2 protein_coding Danio_rerio
ENSMUSG00000027007 Ssfa2 sperm specific antigen 2 protein_coding Mus_musculus

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