C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000L1_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000090656-ENSDARG00000023627 | CGP | 7955 | 13:50542136-50766894  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000023627  (ggps1)geranylgeranyl diphosphate synthase 1 |
ENSDART00000037559 (ggps1-201)
|
50724867-50764129 | protein_coding | |
|
ENSDART00000097845 (ggps1-202)
|
50725055-50766894 | protein_coding | ||
|
ENSDARG00000090656 (tomm20a) translocase of outer mitochondrial membrane 20 homolog a (yeast) |
ENSDART00000128415 (tomm20a-201)
|
50542136-50705365 | protein_coding | |
|
ENSDART00000148083 (tomm20a-001)
|
50636272-50664149 | protein_coding | ||
|
ENSDARG00000091041 (SNORA14) Small nucleolar RNA SNORA14 |
ENSDART00000129089 (SNORA14.2-201)
|
50578041-50578173 | snoRNA | |
| CIL_0000L1_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000054267-ENSG00000152904 | CGP | 9606 | 1:235131634-235344532 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000054267 (ARID4B) AT rich interactive domain 4B (RBP1-like) |
ENST00000264183 (ARID4B-201)
|
235166895-235328217 | protein_coding | |
|
ENST00000349213 (ARID4B-001)
|
235166895-235328219 | protein_coding | ||
|
ENST00000366603 (ARID4B-004)
|
235166895-235327487 | protein_coding | ||
|
ENST00000418304 (ARID4B-007)
|
235219927-235328196 | protein_coding | ||
|
ENST00000421364 (ARID4B-010)
|
235167884-235328134 | nonsense_mediated_decay | ||
|
ENST00000444620 (ARID4B-006)
|
235177787-235213916 | protein_coding | ||
|
ENST00000462969 (ARID4B-008)
|
235326791-235327863 | retained_intron | ||
|
ENST00000466653 (ARID4B-002)
|
235228311-235328217 | retained_intron | ||
|
ENST00000471257 (ARID4B-003)
|
235180139-235234492 | retained_intron | ||
|
ENST00000474401 (ARID4B-011)
|
235172647-235175643 | retained_intron | ||
|
ENST00000474953 (ARID4B-012)
|
235131634-235194077 | nonsense_mediated_decay | ||
|
ENST00000491632 (ARID4B-005)
|
235177616-235328168 | retained_intron | ||
|
ENST00000494543 (ARID4B-009)
|
235177856-235181865 | processed_transcript | ||
|
ENSG00000152904 (GGPS1) geranylgeranyl diphosphate synthase 1 |
ENST00000282841 (GGPS1-001)
|
235328570-235344532 | protein_coding | |
|
ENST00000358966 (GGPS1-201)
|
235328438-235344525 | protein_coding | ||
|
ENST00000391855 (GGPS1-002)
|
235328571-235343138 | protein_coding | ||
|
ENST00000471812 (GGPS1-005)
|
235328399-235342596 | protein_coding | ||
|
ENST00000482013 (GGPS1-007)
|
235328573-235329984 | processed_transcript | ||
|
ENST00000488594 (GGPS1-003)
|
235327350-235343093 | protein_coding | ||
|
ENST00000489692 (GGPS1-006)
|
235328590-235329429 | processed_transcript | ||
|
ENST00000497327 (GGPS1-008)
|
235329029-235342559 | protein_coding | ||
|
ENSG00000188739 (RBM34) RNA binding motif protein 34 |
ENST00000408888 (RBM34-001)
|
235131183-235161457 | protein_coding | |
|
ENST00000429912 (RBM34-004)
|
235154930-235161258 | protein_coding | ||
|
ENST00000447801 (RBM34-010)
|
235131667-235161220 | protein_coding | ||
|
ENST00000468751 (RBM34-006)
|
235154881-235161171 | retained_intron | ||
|
ENST00000474086 (RBM34-005)
|
235135649-235161234 | nonsense_mediated_decay | ||
|
ENST00000475960 (RBM34-007)
|
235155088-235160962 | retained_intron | ||
|
ENST00000476261 (RBM34-002)
|
235152488-235161232 | retained_intron | ||
|
ENST00000485019 (RBM34-008)
|
235160195-235161216 | processed_transcript | ||
|
ENST00000486751 (RBM34-003)
|
235160150-235161283 | retained_intron | ||
|
ENST00000495224 (RBM34-009)
|
235131649-235136114 | processed_transcript | ||
|
ENSG00000227962 (RP11-382D8.3) |
ENST00000254724 (RP11-382D8.3-001)
|
235336806-235337087 | processed_pseudogene | |
|
ENSG00000236863 (RPL23AP23) ribosomal protein L23a pseudogene 23 |
ENST00000452590 (RPL23AP23-001)
|
235295865-235296335 | processed_pseudogene | |
Expression Patterns
|
