C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000NY_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000166748-ENSG00000140538 | CGP | 9606 | 15:86141996-88256768  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000140538  (NTRK3)neurotrophic tyrosine kinase, receptor, type 3 |
ENST00000317501 (NTRK3-002)
|
87977364-88256159 | protein_coding | |
|
ENST00000355254 (NTRK3-201)
|
87876757-88256731 | protein_coding | ||
|
ENST00000357724 (NTRK3-202)
|
87876757-88256731 | protein_coding | ||
|
ENST00000360948 (NTRK3-203)
|
87876757-88256731 | protein_coding | ||
|
ENST00000394480 (NTRK3-001)
|
87859751-88256747 | protein_coding | ||
|
ENST00000540489 (NTRK3-204)
|
87979345-88256731 | protein_coding | ||
|
ENST00000542733 (NTRK3-003)
|
87916273-88205933 | protein_coding | ||
|
ENST00000557856 (NTRK3-004)
|
87876791-88256177 | protein_coding | ||
|
ENST00000557897 (NTRK3-009)
|
88072601-88126361 | processed_transcript | ||
|
ENST00000558306 (NTRK3-017)
|
87979054-88127191 | nonsense_mediated_decay | ||
|
ENST00000558576 (NTRK3-007)
|
87916262-87933090 | protein_coding | ||
|
ENST00000558676 (NTRK3-015)
|
87926656-88256179 | protein_coding | ||
|
ENST00000559067 (NTRK3-013)
|
88255906-88256768 | processed_transcript | ||
|
ENST00000559188 (NTRK3-005)
|
88137461-88252622 | protein_coding | ||
|
ENST00000559680 (NTRK3-008)
|
87931082-87940735 | processed_transcript | ||
|
ENST00000559764 (NTRK3-011)
|
88131969-88136478 | processed_transcript | ||
|
ENST00000560017 (NTRK3-010)
|
88072551-88135938 | protein_coding | ||
|
ENST00000560201 (NTRK3-016)
|
87977367-87978803 | processed_transcript | ||
|
ENST00000560739 (NTRK3-006)
|
88072424-88099265 | processed_transcript | ||
|
ENSG00000166748 (AGBL1) ATP/GTP binding protein-like 1 |
ENST00000421325 (AGBL1-201)
|
86142011-86674452 | protein_coding | |
|
ENST00000441037 (AGBL1-001)
|
86141996-87029052 | protein_coding | ||
|
ENST00000567715 (AGBL1-003)
|
86262625-86296215 | retained_intron | ||
|
ENST00000568785 (AGBL1-002)
|
86262625-86295511 | retained_intron | ||
|
ENSG00000259183 (MED28P6) mediator complex subunit 28 pseudogene 6 |
ENST00000558776 (MED28P6-001)
|
88143935-88144165 | processed_pseudogene | |
|
ENSG00000259527 (LINC00052) long intergenic non-protein coding RNA 52 |
ENST00000560153 (LINC00052-002)
|
87576929-87579866 | lincRNA | |
|
ENSG00000259560 (RP11-648K4.2) |
ENST00000560439 (RP11-648K4.2-001)
|
87432058-87703852 | lincRNA | |
|
ENSG00000259620 (RP11-133L19.1) |
ENST00000558587 (RP11-133L19.1-001)
|
86938797-86988426 | antisense | |
|
ENSG00000259636 (RP11-133L19.2) |
ENST00000560696 (RP11-133L19.2-001)
|
86932880-86946331 | sense_intronic | |
|
ENSG00000259761 (RP11-138H10.2) |
ENST00000560803 (RP11-138H10.2-001)
|
87042054-87047161 | lincRNA | |
|
ENSG00000260125 (AGBL1-AS1) AGBL1 antisense RNA 1 |
ENST00000563472 (AGBL1-AS1-002)
|
86305051-86317173 | antisense | |
|
ENST00000564487 (AGBL1-AS1-003)
|
86295649-86304981 | antisense | ||
|
ENST00000566878 (AGBL1-AS1-001)
|
86296868-86316963 | antisense | ||
|
ENSG00000260305 (NTRK3-AS1) NTRK3 antisense RNA 1 |
ENST00000569588 (NTRK3-AS1-001)
|
88252730-88271066 | lincRNA | |
|
ENSG00000273540 (RP11-133L19.3) |
ENST00000614907 (RP11-133L19.3-001)
|
86914443-86916155 | sense_intronic | |
| CIL_0000NY_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000025754-ENSMUSG00000059146 | CGP | 10090 | 7:76318072-78578408 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000059146 (Ntrk3) neurotrophic tyrosine kinase, receptor, type 3 |
ENSMUST00000039431 (Ntrk3-001)
|
78192362-78578408 | protein_coding | |
|
ENSMUST00000039438 (Ntrk3-002)
|
78302323-78577975 | protein_coding | ||
|
ENSMUST00000151885 (Ntrk3-004)
|
78302323-78377822 | processed_transcript | ||
|
ENSMUST00000155795 (Ntrk3-003)
|
78449625-78577975 | retained_intron | ||
Expression Patterns
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