Transcript ID | Breast | Liver | Muscle |
---|---|---|---|
ENSMUST00000044217 | 0.634±0.00 | 0.191±0.01 | 0.214±0.02 |
Transcript Info |
||||||
Description: | spectrin repeat containing, nuclear envelope 2 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000044217 | Syne2-201 | ENSMUSG00000063450 | 10090 | + | 12:75818318-76110900 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0004WO | CIL_0004WO_0002 | CGP | 12:75714248-76110926 |
CIL_00010O | CIL_00010O_0002 | CGP | 12:75818134-76177259 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0003779 | IEA:IDA | actin binding |
GO:0005634 | IEA | nucleus |
GO:0005635 | IDA | nuclear envelope |
GO:0005737 | IEA | cytoplasm |
GO:0005739 | IEA | mitochondrion |
GO:0005925 | IEA | focal adhesion |
GO:0006998 | IMP | nuclear envelope organization |
GO:0007097 | IEA | nuclear migration |
GO:0007163 | IMP | establishment or maintenance of cell polarity |
GO:0010761 | IMP | fibroblast migration |
GO:0016021 | IEA | integral component of membrane |
GO:0016235 | IEA | aggresome |
GO:0016529 | IEA | sarcoplasmic reticulum |
GO:0030016 | IDA | myofibril |
GO:0030018 | IDA | Z disc |
GO:0030335 | IMP | positive regulation of cell migration |
GO:0031022 | IMP | nuclear migration along microfilament |
GO:0031258 | IEA | lamellipodium membrane |
GO:0031527 | IEA | filopodium membrane |
GO:0031965 | IDA | nuclear membrane |
GO:0031981 | IEA | nuclear lumen |
GO:0034504 | IMP | protein localization to nucleus |
GO:0034993 | IEA | SUN-KASH complex |
GO:0045111 | IEA | intermediate filament cytoskeleton |
GO:0051642 | IMP | centrosome localization |
GO:0090286 | IEA | cytoskeletal anchoring at nuclear membrane |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSDART00000157340 | SPTBN5-001 | protein_coding | Danio_rerio | 0.00003 | 58 |
ENST00000341472 | SYNE2-004 | protein_coding | Homo_sapiens | 0 | 889 |
ENST00000344113 | SYNE2-001 | protein_coding | Homo_sapiens | 0 | 10920 |
ENST00000357395 | SYNE2-201 | protein_coding | Homo_sapiens | 0 | 2302 |
ENST00000358025 | SYNE2-202 | protein_coding | Homo_sapiens | 0 | 10170 |
ENST00000394768 | SYNE2-014 | protein_coding | Homo_sapiens | 0 | 6918 |
ENST00000441438 | SYNE2-007 | protein_coding | Homo_sapiens | 0 | 289 |
ENST00000458046 | SYNE2-006 | protein_coding | Homo_sapiens | 0 | 289 |
ENST00000553289 | SYNE2-013 | nonsense_mediated_decay | Homo_sapiens | 0 | 2342 |
ENST00000553308 | SYNE2-025 | protein_coding | Homo_sapiens | 0 | 296 |
ENST00000553801 | SYNE2-016 | processed_transcript | Homo_sapiens | 0 | 298 |
ENST00000553806 | SYNE2-019 | retained_intron | Homo_sapiens | 0 | 800 |
ENST00000554584 | SYNE2-002 | protein_coding | Homo_sapiens | 0 | 2302 |
ENST00000554805 | SYNE2-005 | protein_coding | Homo_sapiens | 0 | 1844 |
ENST00000554997 | SYNE2-020 | retained_intron | Homo_sapiens | 0 | 518 |
ENST00000555002 | SYNE2-011 | protein_coding | Homo_sapiens | 0 | 7060 |
ENST00000555022 | SYNE2-009 | protein_coding | Homo_sapiens | 0 | 2109 |
ENST00000555241 | SYNE2-018 | processed_transcript | Homo_sapiens | 0 | 436 |
ENST00000555612 | SYNE2-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 2466 |
ENST00000556906 | SYNE2-017 | protein_coding | Homo_sapiens | 0 | 656 |
ENST00000557005 | SYNE2-003 | retained_intron | Homo_sapiens | 0 | 1382 |
ENST00000557084 | SYNE2-022 | nonsense_mediated_decay | Homo_sapiens | 0 | 457 |