C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00013R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168028-ENSG00000168314 CGP 9606 3:39406689-39529479
GeneTranscriptPositionBiotype
ENSG00000168028 (RPSA)
ribosomal protein SA 		ENST00000301821 (RPSA-001) 39406689-39412542 protein_coding
ENST00000443003 (RPSA-002) 39406735-39412434 protein_coding
ENST00000444512 (RPSA-009) 39406763-39410849 nonsense_mediated_decay
ENST00000458478 (RPSA-008) 39406733-39412059 protein_coding
ENST00000475346 (RPSA-006) 39406718-39408195 retained_intron
ENST00000477325 (RPSA-005) 39406716-39408986 retained_intron
ENST00000478027 (RPSA-003) 39408537-39412438 processed_transcript
ENST00000487876 (RPSA-007) 39406719-39408076 retained_intron
ENST00000490490 (RPSA-010) 39408204-39410934 processed_transcript
ENST00000495394 (RPSA-004) 39410259-39412434 retained_intron
ENSG00000168314 (MOBP)
myelin-associated oligodendrocyte basic protein 		ENST00000311042 (MOBP-015) 39467680-39516001 protein_coding
ENST00000383754 (MOBP-002) 39467605-39516003 protein_coding
ENST00000415443 (MOBP-008) 39467605-39513547 protein_coding
ENST00000420739 (MOBP-001) 39467605-39513512 protein_coding
ENST00000424090 (MOBP-006) 39502063-39524882 nonsense_mediated_decay
ENST00000428261 (MOBP-009) 39467605-39513447 protein_coding
ENST00000436143 (MOBP-013) 39467680-39502224 protein_coding
ENST00000441980 (MOBP-012) 39467680-39503027 protein_coding
ENST00000442631 (MOBP-005) 39502066-39524494 nonsense_mediated_decay
ENST00000447324 (MOBP-010) 39467605-39513602 protein_coding
ENST00000451925 (MOBP-011) 39467198-39502244 protein_coding
ENST00000452959 (MOBP-004) 39467704-39529479 nonsense_mediated_decay
ENST00000479860 (MOBP-014) 39502215-39524556 processed_transcript
ENSG00000202363 (SNORA62)
small nucleolar RNA, H/ACA box 62 		ENST00000365493 (SNORA62-201) 39411054-39411206 snoRNA
CIL_00013R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032518-ENSMUSG00000032517 CGP 10090 9:120127766-120181484
GeneTranscriptPositionBiotype
ENSMUSG00000032517 (Mobp)
myelin-associated oligodendrocytic basic protein 		ENSMUST00000068698 (Mobp-001) 120149742-120169378 protein_coding
ENSMUST00000093773 (Mobp-002) 120149742-120176091 protein_coding
ENSMUST00000111627 (Mobp-201) 120149742-120176091 protein_coding
ENSMUST00000174193 (Mobp-003) 120149742-120181484 nonsense_mediated_decay
ENSMUSG00000032518 (Rpsa)
ribosomal protein SA 		ENSMUST00000035105 (Rpsa-201) 120127766-120132369 protein_coding
ENSMUSG00000064380 (Gm26448)
predicted gene, 26448 		ENSMUST00000082446 (Gm26448-201) 120129351-120129553 snoRNA
ENSMUSG00000064925 (Snora62)
small nucleolar RNA, H/ACA box 62 		ENSMUST00000082991 (Snora62-201) 120130415-120130563 snoRNA
ENSMUSG00000065041 (Gm24044)
predicted gene, 24044 		ENSMUST00000083107 (Gm24044-201) 120128780-120128935 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00013R_0001ENSG00000168028ENST00000301821ENST00000443003ENST00000444512ENST00000458478ENST00000475346ENST00000477325ENST00000478027ENST00000487876ENST00000490490ENST00000495394ENSG00000168314ENST00000311042ENST00000383754ENST00000415443ENST00000420739ENST00000424090ENST00000428261ENST00000436143ENST00000441980ENST00000442631ENST00000447324ENST00000451925ENST00000452959ENST00000479860ENSG00000202363ENST00000365493CIL_00013R_0002ENSMUSG00000032517ENSMUST00000068698ENSMUST00000093773ENSMUST00000111627ENSMUST00000174193ENSMUSG00000032518ENSMUST00000035105ENSMUSG00000064380ENSMUST00000082446ENSMUSG00000064925ENSMUST00000082991ENSMUSG00000065041ENSMUST00000083107
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00013R_0001ENSG00000168028ENST00000301821ENST00000443003ENST00000458478ENST00000477325ENST00000478027ENSG00000168314ENST00000311042ENST00000383754ENST00000415443ENST00000420739ENST00000424090ENST00000441980ENST00000452959ENST00000479860ENSG00000202363ENST00000365493CIL_00013R_0002ENSMUSG00000032517ENSMUST00000068698ENSMUST00000093773ENSMUST00000111627ENSMUST00000174193ENSMUSG00000032518ENSMUST00000035105ENSMUSG00000064380ENSMUST00000082446ENSMUSG00000064925ENSMUST00000082991ENSMUSG00000065041ENSMUST00000083107
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168028 ENST00000301821 N/A N/A 22.698±0.00 120.588±0.00 133.626±0.00 110.235±0.00 30.187±0.00 60.951±0.00 96.181±0.00 95.282±0.00 76.826±0.00 117.940±54.59 62.423±3.77 N/A
ENST00000443003 61.953±0.00 126.569±0.00 N/A 16.396±0.00 51.472±0.00 147.562±0.00 16.680±0.00 69.921±0.00 49.618±0.00 49.561±0.00 27.339±0.00 81.803±51.98 64.656±0.00 85.197±0.00
ENST00000444512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458478 N/A N/A N/A 30.261±0.00 N/A 71.872±0.00 N/A 51.816±0.00 45.963±0.00 90.039±0.00 25.021±0.00 252.506±116.42 191.589±49.75 52.935±2.35
ENST00000475346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 141.667±0.00 N/A N/A
ENST00000478027 67.747±0.00 251.082±0.00 N/A 32.423±0.00 75.882±0.00 60.265±0.00 N/A 35.806±0.00 17.624±0.00 66.506±0.00 N/A 293.607±87.26 230.496±48.88 67.804±26.52
ENST00000487876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168314 ENST00000311042 0.016±0.00 N/A N/A N/A N/A 0.048±0.00 0.073±0.00 N/A N/A N/A N/A 0.107±0.09 N/A 2.347±1.60
ENST00000383754 N/A N/A N/A 20.970±5.50 0.043±0.00 N/A 0.013±0.00 N/A N/A N/A 0.004±0.00 N/A 0.033±0.00 N/A
ENST00000415443 N/A N/A N/A N/A 0.247±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420739 N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000424090 N/A N/A N/A N/A N/A N/A 0.053±0.00 N/A N/A N/A N/A N/A N/A 1.813±0.00
ENST00000428261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441980 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.00 N/A N/A
ENST00000442631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452959 0.013±0.00 0.113±0.00 0.015±0.00 11.471±5.45 0.038±0.00 0.041±0.00 0.031±0.00 0.078±0.00 0.112±0.00 N/A 0.002±0.00 0.013±0.01 0.077±0.00 N/A
ENST00000479860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.037±0.00
ENSG00000202363 ENST00000365493 N/A N/A 278.244±0.00 N/A N/A 1127.480±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032517 ENSMUST00000068698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.03 0.004±0.00 0.131±0.03
ENSMUST00000093773 N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00
ENSMUST00000111627 N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A 0.003±0.00 N/A N/A 0.026±0.01 0.007±0.00 0.035±0.01
ENSMUST00000174193 0.032±0.02 N/A N/A 64.541±91.25 0.053±0.03 N/A 0.026±0.01 N/A 0.006±0.00 0.022±0.00 0.027±0.00 0.166±0.08 0.009±0.01 0.090±0.00
ENSMUSG00000032518 ENSMUST00000035105 174.054±91.69 439.719±170.89 56.566±0.32 62.710±30.83 602.990±275.09 567.830±151.96 126.575±104.22 161.361±87.41 184.386±98.26 283.208±128.82 95.378±56.03 526.037±360.72 126.027±108.97 39.253±35.20
ENSMUSG00000064380 ENSMUST00000082446 8.824±1.74 4.458±2.77 1.302±0.00 0.853±0.54 4.684±1.54 5.920±3.35 1.557±0.49 N/A 2.617±0.98 2.193±0.00 N/A 6.313±5.39 1.582±0.98 1.774±0.48
ENSMUSG00000064925 ENSMUST00000082991 555.509±0.00 N/A 5.867±1.24 3.041±0.93 N/A N/A N/A N/A 14.389±8.43 N/A N/A 20.880±0.00 22.695±22.67 N/A
ENSMUSG00000065041 ENSMUST00000083107 919.911±0.00 N/A 4.888±2.26 4.194±1.18 653.639±307.37 1629.217±1464.78 N/A N/A 24.375±22.42 185.003±0.00 0.933±0.00 137.339±174.42 23.076±28.65 N/A

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