C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribosomal protein SA | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000495394  |
RPSA-004 |
ENSG00000168028 |
9606 | + |
3:39410259-39412434  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000146 | CIL_000146_0001 | CGP | 3:39383348-39412542 |
| CIL_00013R | CIL_00013R_0001 | CGP | 3:39406689-39529479 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000121691
|
Rpsa-ps4-001 | processed_pseudogene | Mus_musculus | 0 | 346 |
|
ENSMUST00000186198
|
RP23-2I19.1-001 | processed_pseudogene | Mus_musculus | 0 | 340 |
|
ENSMUST00000120702
|
Rpsa-ps9-001 | processed_pseudogene | Mus_musculus | 0 | 340 |
|
ENSMUST00000035105
|
Rpsa-201 | protein_coding | Mus_musculus | 0 | 340 |
|
ENSMUST00000057740
|
Rpsa-ps10-201 | protein_coding | Mus_musculus | 0 | 335 |
|
ENSMUST00000191040
|
Rpsa-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 329 |
|
ENSMUST00000059546
|
Rpsa-ps2-201 | processed_pseudogene | Mus_musculus | 0 | 311 |
|
ENSMUST00000120423
|
Gm9083-001 | processed_pseudogene | Mus_musculus | 0 | 307 |
|
ENSMUST00000118446
|
Rpsa-ps11-001 | processed_pseudogene | Mus_musculus | 0 | 302 |
|
ENSDART00000135945
|
rpsa-001 | protein_coding | Danio_rerio | 0 | 265 |
|
ENSMUST00000118817
|
Gm5764-001 | processed_pseudogene | Mus_musculus | 0 | 237 |
