C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001FG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114450-ENSG00000136518 CGP 9606 3:179399202-179588408
GeneTranscriptPositionBiotype
ENSG00000114450 (GNB4)
guanine nucleotide binding protein (G protein), beta polypeptide 4 		ENST00000232564 (GNB4-001) 179399202-179451590 protein_coding
ENST00000465153 (GNB4-006) 179410325-179413730 processed_transcript
ENST00000466899 (GNB4-004) 179400849-179416526 protein_coding
ENST00000468623 (GNB4-003) 179401087-179451145 protein_coding
ENST00000497513 (GNB4-005) 179416521-179451476 protein_coding
ENSG00000136518 (ACTL6A)
actin-like 6A 		ENST00000392662 (ACTL6A-201) 179562920-179588398 protein_coding
ENST00000429709 (ACTL6A-001) 179562880-179588408 protein_coding
ENST00000450518 (ACTL6A-002) 179562886-179588407 protein_coding
ENST00000461125 (ACTL6A-016) 179586488-179588241 retained_intron
ENST00000467383 (ACTL6A-013) 179574353-179576275 retained_intron
ENST00000467615 (ACTL6A-014) 179575010-179581008 processed_transcript
ENST00000468767 (ACTL6A-007) 179562923-179575488 processed_transcript
ENST00000479056 (ACTL6A-015) 179576376-179580955 retained_intron
ENST00000484312 (ACTL6A-018) 179581164-179586708 retained_intron
ENST00000486471 (ACTL6A-012) 179573234-179575210 retained_intron
ENST00000487978 (ACTL6A-011) 179569815-179580701 nonsense_mediated_decay
ENST00000490364 (ACTL6A-009) 179562959-179570241 protein_coding
ENST00000491202 (ACTL6A-006) 179562923-179570391 retained_intron
ENST00000494843 (ACTL6A-008) 179562930-179574563 retained_intron
ENSG00000136522 (MRPL47)
mitochondrial ribosomal protein L47 		ENST00000259038 (MRPL47-002) 179588455-179604640 protein_coding
ENST00000392659 (MRPL47-003) 179588831-179604649 protein_coding
ENST00000476781 (MRPL47-001) 179588285-179604654 protein_coding
ENSG00000181260 (MTHFD2P7)
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 7 		ENST00000483867 (MTHFD2P7-001) 179464346-179465328 processed_pseudogene
ENSG00000272660 (RP11-145M9.6)
 ENST00000610007 (RP11-145M9.6-001) 179584271-179584410 antisense
ENSG00000272699 (RP11-145M9.5)
 ENST00000608131 (RP11-145M9.5-001) 179405448-179405944 antisense
CIL_0001FG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027669-ENSMUSG00000027671 CGP 10090 3:32580332-32726968
GeneTranscriptPositionBiotype
ENSMUSG00000027669 (Gnb4)
guanine nucleotide binding protein (G protein), beta 4 		ENSMUST00000108234 (Gnb4-002) 32583998-32616517 protein_coding
ENSMUST00000143588 (Gnb4-006) 32599844-32616529 retained_intron
ENSMUST00000144292 (Gnb4-004) 32592211-32616525 retained_intron
ENSMUST00000152901 (Gnb4-003) 32583998-32616525 retained_intron
ENSMUST00000155737 (Gnb4-001) 32580332-32616585 protein_coding
ENSMUST00000184130 (Gnb4-005) 32585055-32616522 nonsense_mediated_decay
ENSMUSG00000027671 (Actl6a)
actin-like 6A 		ENSMUST00000029214 (Actl6a-001) 32708546-32726968 protein_coding
ENSMUST00000126144 (Actl6a-003) 32709164-32718656 protein_coding
ENSMUST00000135400 (Actl6a-004) 32711383-32712170 retained_intron
ENSMUST00000153779 (Actl6a-002) 32718567-32726968 retained_intron
ENSMUSG00000037531 (Mrpl47)
mitochondrial ribosomal protein L47 		ENSMUST00000043966 (Mrpl47-001) 32725397-32737147 protein_coding
ENSMUST00000153564 (Mrpl47-002) 32727575-32732613 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FG_0001ENSG00000114450ENST00000232564ENST00000465153ENST00000466899ENST00000468623ENST00000497513ENSG00000136518ENST00000392662ENST00000429709ENST00000450518ENST00000461125ENST00000467383ENST00000467615ENST00000468767ENST00000479056ENST00000484312ENST00000486471ENST00000487978ENST00000490364ENST00000491202ENST00000494843ENSG00000136522ENST00000259038ENST00000392659ENST00000476781ENSG00000181260ENST00000483867ENSG00000272660ENST00000610007ENSG00000272699ENST00000608131CIL_0001FG_0002ENSMUSG00000027669ENSMUST00000108234ENSMUST00000143588ENSMUST00000144292ENSMUST00000152901ENSMUST00000155737ENSMUST00000184130ENSMUSG00000027671ENSMUST00000029214ENSMUST00000126144ENSMUST00000135400ENSMUST00000153779ENSMUSG00000037531ENSMUST00000043966ENSMUST00000153564
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FG_0001ENSG00000114450ENST00000232564ENST00000468623ENSG00000136518ENST00000392662ENST00000429709ENST00000450518ENST00000490364ENST00000491202ENSG00000136522ENST00000259038ENST00000392659ENST00000476781ENSG00000181260ENST00000483867ENSG00000272660ENST00000610007ENSG00000272699ENST00000608131CIL_0001FG_0002ENSMUSG00000027669ENSMUST00000108234ENSMUST00000144292ENSMUST00000152901ENSMUST00000155737ENSMUST00000184130ENSMUSG00000027671ENSMUST00000029214ENSMUST00000126144ENSMUSG00000037531ENSMUST00000043966
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114450 ENST00000232564 3.859±0.00 4.806±0.00 N/A 3.866±0.53 6.931±3.27 2.120±0.29 1.493±0.27 1.036±0.00 1.608±0.00 4.742±2.49 0.650±0.00 1.689±0.86 2.413±0.24 1.352±0.61
ENST00000465153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468623 N/A N/A N/A N/A N/A 2.827±0.00 0.980±0.00 N/A 4.704±0.00 N/A N/A N/A N/A N/A
ENST00000497513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136518 ENST00000392662 N/A 7.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429709 N/A N/A 0.989±0.00 N/A 1.506±0.00 6.191±0.00 N/A 1.625±0.00 2.379±0.00 3.176±1.99 2.839±0.00 16.951±1.40 9.680±1.00 12.244±0.00
ENST00000450518 7.139±0.00 3.941±0.00 1.764±0.00 1.919±0.08 5.415±0.10 10.231±0.00 2.585±1.20 8.934±0.00 2.538±1.10 2.441±0.43 1.957±0.07 7.264±0.00 N/A 17.935±0.00
ENST00000461125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490364 N/A N/A N/A N/A N/A N/A N/A 11.079±0.00 N/A N/A N/A N/A N/A N/A
ENST00000491202 N/A N/A 5.673±0.00 N/A 9.200±0.00 10.487±0.00 2.604±0.00 N/A 12.370±0.00 4.497±0.00 N/A 20.904±0.00 N/A N/A
ENST00000494843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136522 ENST00000259038 N/A N/A N/A 4.176±0.00 N/A N/A 3.858±0.00 N/A N/A N/A N/A 20.085±0.00 11.798±0.00 31.986±0.00
ENST00000392659 14.255±0.00 22.215±0.00 N/A 5.833±2.35 17.627±0.00 18.825±0.00 8.731±6.46 14.515±11.67 13.421±0.00 9.460±0.00 9.313±0.00 N/A 10.120±0.00 44.044±0.00
ENST00000476781 6.265±0.00 5.892±0.00 1.527±0.00 5.067±1.07 4.829±1.80 6.635±1.34 4.749±2.30 8.171±4.96 3.407±0.57 2.926±0.24 3.327±0.38 10.169±4.25 7.657±0.38 21.236±7.40
ENSG00000181260 ENST00000483867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A
ENSG00000272660 ENST00000610007 0.547±0.00 1.461±0.00 5.289±0.00 N/A 1.138±0.00 N/A N/A 1.184±0.00 0.477±0.00 26.748±26.63 1.639±0.00 8.877±0.00 2.189±0.00 0.247±0.00
ENSG00000272699 ENST00000608131 0.020±0.00 0.422±0.00 N/A 0.389±0.35 0.467±0.26 0.530±0.00 0.111±0.00 0.074±0.00 N/A 0.613±0.00 N/A 0.335±0.16 0.143±0.04 0.473±0.46
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027669 ENSMUST00000108234 3.945±0.00 4.566±2.78 4.705±0.38 4.408±0.10 3.757±2.14 1.199±0.00 1.549±0.00 1.299±0.00 1.171±0.34 5.568±0.00 0.949±0.14 3.057±0.83 15.045±8.34 0.333±0.05
ENSMUST00000143588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144292 N/A N/A N/A N/A 1.731±0.00 N/A N/A N/A N/A N/A 0.213±0.00 1.708±0.92 2.570±0.00 0.077±0.00
ENSMUST00000152901 4.746±0.86 3.062±0.74 3.959±0.56 4.678±0.00 4.367±1.41 2.993±1.03 1.959±0.24 1.199±0.28 0.825±0.51 8.649±1.54 1.074±0.26 6.876±1.63 15.532±4.49 0.338±0.09
ENSMUST00000155737 2.687±0.94 1.620±0.54 2.974±0.09 4.506±2.51 2.143±0.35 1.398±0.17 1.368±0.26 1.195±0.19 0.457±0.20 4.213±0.53 0.549±0.26 3.511±1.05 4.095±2.22 0.148±0.06
ENSMUST00000184130 11.237±2.03 4.340±0.43 N/A 4.838±0.90 11.598±8.97 3.490±0.72 3.916±0.43 1.847±0.25 0.943±0.69 7.067±2.03 N/A 9.615±3.27 N/A 0.488±0.09
ENSMUSG00000027671 ENSMUST00000029214 8.111±1.60 N/A N/A 10.608±0.00 N/A 10.438±0.00 N/A N/A 20.408±8.24 7.958±0.88 N/A 11.175±2.67 17.277±3.54 18.761±4.84
ENSMUST00000126144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.051±0.00 37.729±0.00 49.392±0.00
ENSMUST00000135400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037531 ENSMUST00000043966 N/A N/A 3.924±0.09 4.218±1.39 6.343±0.00 N/A N/A N/A 5.938±1.71 2.754±0.00 N/A 4.389±0.54 5.058±1.28 5.420±1.53
ENSMUST00000153564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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