C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21 pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557463 RPL21P7-001 ENSG00000258613 9606 - 14:65266638-65267690 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000557463
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000557463 0.085±0.00 1.124±0.00 0.180±0.00 0.145±0.00 0.218±0.00 0.028±0.00 0.030±0.00 0.027±0.00 0.365±0.00 0.107±0.00 0.135±0.05 0.095±0.00 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PC CIL_0001PC_0001 CGP 14:65006174-65744121

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099272 Rpl21-003 protein_coding Mus_musculus 0 499
ENSMUST00000075453 Rpl21-002 protein_coding Mus_musculus 0 499
ENSMUST00000035983 Rpl21-001 protein_coding Mus_musculus 0 499
ENSMUST00000076314 Gm5528-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000084598 Gm10155-201 processed_pseudogene Mus_musculus 0 494
ENSMUST00000121545 Rpl21-ps15-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000119328 Gm14648-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000121309 Gm13370-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000089785 Gm10240-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000155008 Gm10163-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000121563 Gm15682-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000119140 Gm12411-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000130005 Rpl21-ps8-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000080279 Rpl21-ps14-201 processed_pseudogene Mus_musculus 0 472
ENSMUST00000093411 Gm8054-201 processed_pseudogene Mus_musculus 0 470
ENSMUST00000178657 Gm10045-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000160079 Gm3355-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000122260 Gm13653-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000080330 Gm10916-201 processed_pseudogene Mus_musculus 0 460
ENSMUST00000119542 Gm15921-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000119332 Gm13604-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000095268 Gm9104-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000077420 Rpl21-ps7-201 processed_pseudogene Mus_musculus 0 449
ENSMUST00000095940 Rpl21-ps5-201 processed_pseudogene Mus_musculus 0 449
ENSMUST00000180049 Gm6919-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000081668 Rpl21-ps12-201 processed_pseudogene Mus_musculus 0 444
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000179660 Gm16416-201 processed_pseudogene Mus_musculus 0 438
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000153140 Gm16060-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000118772 Gm11975-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000121800 Gm8880-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000120348 Gm12123-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000120607 Gm13525-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000119242 Gm14115-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000130905 Gm6689-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000120315 Gm9378-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000122454 Gm8840-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000119262 Gm12944-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000080237 Rpl21-ps4-201 protein_coding Mus_musculus 0 309
ENSMUST00000117461 Gm14657-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000120458 Gm7071-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000121644 Gm15309-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000118827 Gm15312-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000185232 RP23-478I8.1-001 processed_pseudogene Mus_musculus 0 217
ENSDART00000002595 rpl21-001 protein_coding Danio_rerio 0 200
ENSMUST00000151871 Rpl21-005 retained_intron Mus_musculus 9.94922e-44 180
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 6e-37 158
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 4e-24 115
ENSMUST00000154768 Rpl21-004 retained_intron Mus_musculus 8e-21 104

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