C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21 pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465083 RPL21P8-001 ENSG00000180662 9606 - 14:65467807-65468341 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000465083
Transcript ID Adrenal Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000465083 0.124±0.00 0.751±0.00 0.072±0.00 0.181±0.11 0.025±0.00 0.245±0.22 0.493±0.40 0.291±0.00 0.055±0.01 0.042±0.00 0.119±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PC CIL_0001PC_0001 CGP 14:65006174-65744121
CIL_0001KA CIL_0001KA_0002 CGP 14:65410592-67181803

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160079 Gm3355-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000084598 Gm10155-201 processed_pseudogene Mus_musculus 0 268
ENSMUST00000080279 Rpl21-ps14-201 processed_pseudogene Mus_musculus 0 268
ENSMUST00000121545 Rpl21-ps15-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000119328 Gm14648-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000155008 Gm10163-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000121309 Gm13370-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000089785 Gm10240-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000099272 Rpl21-003 protein_coding Mus_musculus 0 263
ENSMUST00000075453 Rpl21-002 protein_coding Mus_musculus 0 263
ENSMUST00000035983 Rpl21-001 protein_coding Mus_musculus 0 263
ENSMUST00000080330 Gm10916-201 processed_pseudogene Mus_musculus 0 259
ENSMUST00000121563 Gm15682-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000122260 Gm13653-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000093411 Gm8054-201 processed_pseudogene Mus_musculus 0 257
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000121800 Gm8880-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000119140 Gm12411-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000178657 Gm10045-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000130005 Rpl21-ps8-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000074828 Rpl21-ps6-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000077420 Rpl21-ps7-201 processed_pseudogene Mus_musculus 0 252
ENSMUST00000071237 Rpl21-ps10-201 processed_pseudogene Mus_musculus 0 252
ENSMUST00000095268 Gm9104-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000119897 Rpl21-ps9-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000180049 Gm6919-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000080223 Rpl21-ps3-201 processed_pseudogene Mus_musculus 0 246
ENSMUST00000077278 Rpl21-ps11-201 processed_pseudogene Mus_musculus 0 246
ENSMUST00000130905 Gm6689-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000120348 Gm12123-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000080237 Rpl21-ps4-201 protein_coding Mus_musculus 0 243
ENSMUST00000179660 Gm16416-201 processed_pseudogene Mus_musculus 0 241
ENSMUST00000095940 Rpl21-ps5-201 processed_pseudogene Mus_musculus 0 237
ENSMUST00000117320 Gm15578-001 unprocessed_pseudogene Mus_musculus 0 235
ENSMUST00000079153 Gm8526-201 processed_pseudogene Mus_musculus 0 235
ENSMUST00000072532 Rpl21-ps13-201 processed_pseudogene Mus_musculus 0 235
ENSMUST00000080097 Gm16415-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000121754 Gm12618-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000081668 Rpl21-ps12-201 processed_pseudogene Mus_musculus 0 231
ENSMUST00000121644 Gm15309-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000185232 RP23-478I8.1-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000118827 Gm15312-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000141391 Gm11281-001 processed_pseudogene Mus_musculus 4.06377e-44 182
ENSMUST00000119382 Gm14106-001 processed_pseudogene Mus_musculus 5.00264e-43 178
ENSMUST00000120458 Gm7071-001 processed_pseudogene Mus_musculus 6.99949e-42 174
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 2e-32 143
ENSMUST00000080061 Gm8724-201 processed_pseudogene Mus_musculus 7e-32 141
ENSMUST00000170118 Gm17113-001 processed_pseudogene Mus_musculus 2e-28 130
ENSDART00000002595 rpl21-001 protein_coding Danio_rerio 7e-22 108
ENSMUST00000071805 Sprr2a2-201 protein_coding Mus_musculus 9e-21 104
ENSMUST00000074449 Sprr2a1-201 protein_coding Mus_musculus 9e-21 104
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 7e-17 92

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