C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001WL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174780-ENSG00000196503 CGP 9606 4:56466915-56524448
GeneTranscriptPositionBiotype
ENSG00000174780 (SRP72)
signal recognition particle 72kDa
ENST00000342756 (SRP72-001) 56466915-56503107 protein_coding
ENST00000504757 (SRP72-008) 56467618-56474508 protein_coding
ENST00000505314 (SRP72-002) 56474134-56491565 protein_coding
ENST00000507126 (SRP72-004) 56500512-56503680 retained_intron
ENST00000510663 (SRP72-005) 56467617-56502482 protein_coding
ENSG00000196503 (ARL9)
ADP-ribosylation factor-like 9
ENST00000360096 (ARL9-001) 56505343-56524448 protein_coding
CIL_0001WL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036323-ENSMUSG00000063820 CGP 10090 5:76974683-77010606
GeneTranscriptPositionBiotype
ENSMUSG00000036323 (Srp72)
signal recognition particle 72
ENSMUST00000101087 (Srp72-001) 76974683-76999937 protein_coding
ENSMUST00000120550 (Srp72-002) 76974707-76998816 protein_coding
ENSMUST00000125732 (Srp72-007) 76993993-76994903 retained_intron
ENSMUST00000132860 (Srp72-004) 76996974-76999937 retained_intron
ENSMUST00000141873 (Srp72-003) 76984095-76995146 retained_intron
ENSMUST00000144741 (Srp72-009) 76997405-76998341 retained_intron
ENSMUST00000146167 (Srp72-008) 76995257-76997489 retained_intron
ENSMUST00000148423 (Srp72-006) 76980579-76982714 retained_intron
ENSMUST00000150661 (Srp72-005) 76974721-76980590 retained_intron
ENSMUSG00000063820 (Arl9)
ADP-ribosylation factor-like 9
ENSMUST00000071199 (Arl9-001) 77004055-77009478 protein_coding
ENSMUST00000134197 (Arl9-002) 77006472-77010606 protein_coding
ENSMUSG00000086632 (1700112J05Rik)
RIKEN cDNA 1700112J05 gene
ENSMUST00000129353 (1700112J05Rik-001) 77006449-77018863 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WL_0001ENSG00000174780ENST00000342756ENST00000504757ENST00000505314ENST00000507126ENST00000510663ENSG00000196503ENST00000360096CIL_0001WL_0002ENSMUSG00000036323ENSMUST00000101087ENSMUST00000120550ENSMUST00000125732ENSMUST00000132860ENSMUST00000141873ENSMUST00000144741ENSMUST00000146167ENSMUST00000148423ENSMUST00000150661ENSMUSG00000063820ENSMUST00000071199ENSMUST00000134197ENSMUSG00000086632ENSMUST00000129353
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WL_0001ENSG00000174780ENST00000342756ENST00000504757ENST00000505314ENST00000507126ENST00000510663ENSG00000196503ENST00000360096CIL_0001WL_0002ENSMUSG00000036323ENSMUST00000101087ENSMUST00000120550ENSMUST00000132860ENSMUST00000150661ENSMUSG00000063820ENSMUST00000071199ENSMUST00000134197ENSMUSG00000086632ENSMUST00000129353
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000174780 ENST00000342756 5.488±0.00 7.374±0.00 2.590±0.00 6.692±1.37 4.502±0.07 6.254±1.88 1.546±0.69 3.673±0.83 5.000±0.55 5.790±1.50 1.364±0.56 9.698±3.47 8.682±2.83 11.196±4.75
ENST00000504757 N/A N/A N/A N/A N/A N/A 1.847±0.00 N/A 6.075±0.00 N/A 1.115±0.00 N/A N/A N/A
ENST00000505314 N/A N/A N/A N/A N/A N/A N/A 6.923±0.00 N/A 8.733±0.00 2.156±0.88 N/A N/A N/A
ENST00000507126 3.252±0.00 6.812±0.00 N/A 5.463±0.00 4.781±0.00 4.241±0.00 2.220±0.00 8.239±0.00 4.552±0.00 5.258±0.00 1.958±0.00 7.517±0.47 6.714±0.27 5.776±0.00
ENST00000510663 12.368±0.00 7.143±0.00 N/A 10.688±0.00 5.487±1.57 8.102±0.00 3.090±2.12 4.172±1.58 6.162±0.00 8.311±0.00 2.344±2.08 6.430±2.27 7.917±1.66 10.963±0.00
ENSG00000196503 ENST00000360096 N/A 0.165±0.00 N/A 0.652±0.15 0.230±0.07 0.190±0.00 0.060±0.00 0.304±0.00 N/A 0.109±0.00 N/A 0.306±0.09 0.075±0.00 1.409±0.70
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036323 ENSMUST00000101087 15.143±1.50 9.085±1.72 23.791±1.83 17.205±7.34 11.032±1.02 10.143±1.35 7.794±0.60 11.767±0.60 20.530±5.48 11.143±2.52 10.321±0.54 18.099±8.33 26.478±13.92 17.642±6.19
ENSMUST00000120550 N/A N/A N/A 14.936±0.00 N/A N/A N/A N/A N/A N/A N/A 25.598±0.00 26.763±10.03 23.880±0.00
ENSMUST00000125732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132860 4.354±0.00 3.038±0.58 N/A N/A N/A 3.679±0.08 N/A N/A N/A N/A N/A 5.493±1.05 N/A N/A
ENSMUST00000141873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.358±0.25
ENSMUSG00000063820 ENSMUST00000071199 N/A N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A 0.201±0.00 0.307±0.00 0.633±0.00 0.200±0.00 N/A
ENSMUST00000134197 N/A N/A 0.136±0.00 N/A 0.283±0.06 0.199±0.01 N/A 0.159±0.08 0.251±0.08 N/A 0.093±0.04 0.247±0.10 0.520±0.22 26.554±11.42
ENSMUSG00000086632 ENSMUST00000129353 0.069±0.02 N/A 0.020±0.00 0.039±0.00 0.259±0.00 N/A N/A 0.061±0.03 0.026±0.00 0.069±0.00 N/A 0.126±0.08 0.091±0.06 11.136±1.10

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