C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00023X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113263-ENSG00000113263 CGP 9606 5:157142933-157255191
GeneTranscriptPositionBiotype
ENSG00000113263 (ITK)
IL2-inducible T-cell kinase 		ENST00000422843 (ITK-001) 157180826-157255191 protein_coding
ENST00000517779 (ITK-007) 157180867-157214210 nonsense_mediated_decay
ENST00000519402 (ITK-002) 157180843-157255099 retained_intron
ENST00000519749 (ITK-005) 157241591-157255185 processed_transcript
ENST00000519759 (ITK-009) 157222749-157240131 retained_intron
ENST00000520173 (ITK-010) 157240093-157244275 retained_intron
ENST00000520555 (ITK-006) 157180840-157211511 retained_intron
ENST00000521769 (ITK-008) 157142933-157222963 protein_coding
ENST00000522616 (ITK-003) 157180837-157195907 processed_transcript
ENST00000523926 (ITK-011) 157244891-157245976 retained_intron
ENSG00000155868 (MED7)
mediator complex subunit 7 		ENST00000286317 (MED7-001) 157137412-157143184 protein_coding
ENST00000420343 (MED7-201) 157138442-157142775 protein_coding
ENST00000524289 (MED7-003) 157138846-157159019 protein_coding
ENSG00000170613 (FAM71B)
family with sequence similarity 71, member B 		ENST00000302938 (FAM71B-001) 157161846-157166264 protein_coding
ENSG00000253980 (CTB-4E7.1)
 ENST00000519375 (CTB-4E7.1-001) 157199242-157224380 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00023X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020395-ENSMUSG00000020401 CGP 10090 11:46325150-46407982
GeneTranscriptPositionBiotype
ENSMUSG00000020395 (Itk)
IL2 inducible T cell kinase 		ENSMUST00000020664 (Itk-001) 46325150-46389515 protein_coding
ENSMUST00000101306 (Itk-002) 46344478-46389457 protein_coding
ENSMUST00000109237 (Itk-004) 46325150-46389493 protein_coding
ENSMUST00000155991 (Itk-003) 46363103-46389461 retained_intron
ENSMUSG00000020401 (Fam71b)
family with sequence similarity 71, member B 		ENSMUST00000063166 (Fam71b-001) 46404730-46407982 protein_coding
ENSMUST00000139280 (Fam71b-002) 46396559-46406615 processed_transcript
ENSMUSG00000085853 (Gm12167)
predicted gene 12167 		ENSMUST00000148132 (Gm12167-001) 46342287-46345020 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023X_0001ENSG00000113263ENST00000422843ENST00000517779ENST00000519402ENST00000519749ENST00000519759ENST00000520173ENST00000520555ENST00000521769ENST00000522616ENST00000523926ENSG00000155868ENST00000286317ENST00000420343ENST00000524289ENSG00000170613ENST00000302938ENSG00000253980ENST00000519375CIL_00023X_0002ENSMUSG00000020395ENSMUST00000020664ENSMUST00000101306ENSMUST00000109237ENSMUST00000155991ENSMUSG00000020401ENSMUST00000063166ENSMUST00000139280ENSMUSG00000085853ENSMUST00000148132
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00023X_0001ENSG00000113263ENST00000422843ENST00000519402ENST00000519749ENSG00000155868ENST00000286317ENST00000420343ENST00000524289ENSG00000170613ENST00000302938ENSG00000253980ENST00000519375CIL_00023X_0002ENSMUSG00000020395ENSMUST00000020664ENSMUST00000101306ENSMUST00000109237ENSMUSG00000020401ENSMUST00000063166ENSMUST00000139280ENSMUSG00000085853ENSMUST00000148132
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113263 ENST00000422843 N/A 2.046±0.00 N/A N/A 1.066±0.00 0.450±0.00 N/A N/A N/A 1.491±0.16 N/A N/A N/A N/A
ENST00000517779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519402 N/A 2.482±0.00 N/A N/A 0.722±0.00 0.297±0.00 N/A N/A N/A 1.280±0.00 N/A N/A N/A N/A
ENST00000519749 N/A 6.112±0.00 N/A N/A N/A N/A N/A 0.924±0.00 N/A 1.725±0.00 N/A 0.645±0.00 N/A N/A
ENST00000519759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155868 ENST00000286317 1.480±0.00 N/A 0.887±0.00 1.946±0.06 1.524±0.00 1.954±0.00 0.680±0.00 1.909±0.34 0.398±0.00 3.179±0.00 1.913±0.00 N/A N/A N/A
ENST00000420343 3.298±0.00 N/A 2.038±0.00 2.129±0.81 4.094±0.00 1.599±0.00 2.653±0.00 5.873±0.00 2.212±0.00 N/A 0.574±0.00 3.740±0.60 4.944±1.40 14.968±1.43
ENST00000524289 N/A N/A 2.375±0.00 1.241±0.00 N/A 1.506±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170613 ENST00000302938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.038±0.84
ENSG00000253980 ENST00000519375 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.378±0.17 N/A 0.668±0.50 N/A 0.086±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020395 ENSMUST00000020664 0.175±0.13 0.058±0.04 0.199±0.02 0.011±0.00 4.475±2.03 0.338±0.14 0.208±0.06 0.382±0.36 0.070±0.05 1.023±0.03 0.196±0.27 0.106±0.08 1.015±0.81 0.007±0.00
ENSMUST00000101306 0.098±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 0.835±0.00 0.089±0.00
ENSMUST00000109237 0.049±0.02 0.020±0.01 N/A 0.011±0.00 N/A 0.223±0.07 N/A 0.026±0.01 0.047±0.03 N/A 0.007±0.00 0.085±0.07 0.085±0.00 0.007±0.00
ENSMUST00000155991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020401 ENSMUST00000063166 0.037±0.02 0.103±0.03 0.020±0.01 0.020±0.01 0.093±0.05 0.098±0.06 0.030±0.01 0.062±0.02 0.023±0.01 0.110±0.03 N/A 0.244±0.12 0.128±0.08 148.181±61.91
ENSMUST00000139280 N/A N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A 0.181±0.00 0.167±0.00 N/A N/A
ENSMUSG00000085853 ENSMUST00000148132 N/A N/A N/A N/A N/A N/A 5.238±0.31 N/A N/A N/A 0.092±0.00 0.419±0.06 N/A 0.084±0.00

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