C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002XD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123908-ENSG00000169398 CGP 9606 8:140531165-141002216
GeneTranscriptPositionBiotype
ENSG00000123908 (AGO2)
argonaute RISC catalytic component 2 		ENST00000220592 (AGO2-001) 140531165-140635619 protein_coding
ENST00000517293 (AGO2-005) 140572558-140635546 processed_transcript
ENST00000518019 (AGO2-004) 140626485-140635546 processed_transcript
ENST00000519347 (AGO2-009) 140535391-140539449 retained_intron
ENST00000519980 (AGO2-002) 140531421-140635546 protein_coding
ENST00000520412 (AGO2-008) 140532533-140541457 retained_intron
ENST00000520628 (AGO2-010) 140532094-140532706 processed_transcript
ENST00000521325 (AGO2-007) 140555408-140556238 retained_intron
ENST00000523609 (AGO2-003) 140531421-140635546 nonsense_mediated_decay
ENST00000524328 (AGO2-006) 140572902-140605888 protein_coding
ENSG00000169398 (PTK2)
protein tyrosine kinase 2 		ENST00000340930 (PTK2-011) 140658405-141001158 protein_coding
ENST00000395218 (PTK2-201) 140658382-141001313 protein_coding
ENST00000430260 (PTK2-006) 140659073-140718734 protein_coding
ENST00000510126 (PTK2-022) 140744701-140747272 retained_intron
ENST00000517453 (PTK2-043) 140879480-141002110 protein_coding
ENST00000517712 (PTK2-004) 140658405-140670264 protein_coding
ENST00000517887 (PTK2-008) 140658402-140921219 protein_coding
ENST00000518173 (PTK2-056) 140700770-140706168 retained_intron
ENST00000518509 (PTK2-048) 140717689-140744803 processed_transcript
ENST00000519024 (PTK2-053) 140744685-140764421 protein_coding
ENST00000519361 (PTK2-025) 140746834-140765236 processed_transcript
ENST00000519419 (PTK2-007) 140658630-140954835 protein_coding
ENST00000519465 (PTK2-005) 140658402-140764523 protein_coding
ENST00000519635 (PTK2-029) 140925689-141002216 processed_transcript
ENST00000519654 (PTK2-010) 140658389-140890768 protein_coding
ENST00000519881 (PTK2-037) 140879162-141001284 protein_coding
ENST00000519899 (PTK2-023) 140746450-140764401 retained_intron
ENST00000519993 (PTK2-013) 140658405-141001379 nonsense_mediated_decay
ENST00000520045 (PTK2-044) 140879482-141001285 protein_coding
ENST00000520151 (PTK2-054) 140743237-140764413 protein_coding
ENST00000520460 (PTK2-016) 140668289-140675779 processed_transcript
ENST00000520475 (PTK2-033) 140846659-140934560 protein_coding
ENST00000520828 (PTK2-041) 140846649-141001164 protein_coding
ENST00000520843 (PTK2-024) 140750203-140764260 processed_transcript
ENST00000520892 (PTK2-038) 140879441-141000937 protein_coding
ENST00000520917 (PTK2-021) 140735045-140744702 retained_intron
ENST00000521029 (PTK2-051) 140706157-140764353 nonsense_mediated_decay
ENST00000521059 (PTK2-057) 140658402-141001196 protein_coding
ENST00000521172 (PTK2-028) 140752232-140771444 processed_transcript
ENST00000521250 (PTK2-049) 140700943-140800549 nonsense_mediated_decay
ENST00000521332 (PTK2-039) 140890543-141001266 protein_coding
ENST00000521395 (PTK2-034) 140879512-140934590 protein_coding
ENST00000521562 (PTK2-019) 140700924-140718355 protein_coding
ENST00000521791 (PTK2-031) 140830476-141000926 nonsense_mediated_decay
ENST00000521907 (PTK2-035) 140879476-140983994 protein_coding
ENST00000521981 (PTK2-052) 140702698-140800543 nonsense_mediated_decay
ENST00000521985 (PTK2-018) 140686870-140702715 processed_transcript
ENST00000521986 (PTK2-009) 140659335-140800543 protein_coding
ENST00000522424 (PTK2-047) 140700921-140721788 protein_coding
ENST00000522684 (PTK2-001) 140657900-141001233 protein_coding
ENST00000522950 (PTK2-014) 140659620-140663088 protein_coding
ENST00000523067 (PTK2-046) 140846607-141001167 nonsense_mediated_decay
ENST00000523388 (PTK2-020) 140702665-140718048 protein_coding
ENST00000523435 (PTK2-015) 140659487-140663084 protein_coding
ENST00000523474 (PTK2-027) 140744747-140770966 processed_transcript
ENST00000523539 (PTK2-002) 140658405-140800546 protein_coding
ENST00000523670 (PTK2-050) 140743290-140764419 nonsense_mediated_decay
ENST00000523675 (PTK2-036) 140890316-140921009 retained_intron
ENST00000523679 (PTK2-040) 140920870-141001177 protein_coding
ENST00000523746 (PTK2-026) 140744697-140799297 processed_transcript
ENST00000523797 (PTK2-030) 140925588-141001122 processed_transcript
ENST00000523803 (PTK2-032) 140879471-140984039 protein_coding
ENST00000523805 (PTK2-017) 140668279-140686778 processed_transcript
ENST00000524040 (PTK2-045) 140890584-141001266 protein_coding
ENST00000524202 (PTK2-003) 140659071-140846290 nonsense_mediated_decay
ENST00000524257 (PTK2-042) 140920890-141001164 protein_coding
ENST00000524357 (PTK2-055) 140818984-141001260 protein_coding
ENSG00000279786 (CTD-2014D20.1)
 ENST00000623208 (CTD-2014D20.1-001) 140820599-140822414 TEC
ENSG00000280303 (RP11-642A1.3)
 ENST00000623655 (RP11-642A1.3-001) 140637705-140638283 TEC
ENSG00000280326 (RP11-642A1.1)
 ENST00000624905 (RP11-642A1.1-001) 140591684-140593201 TEC

Homo sapiens Ensembl (GRCh38)

Genome
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Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
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CIL_0002XD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036698-ENSMUSG00000022607 CGP 10090 15:73095844-73423191
GeneTranscriptPositionBiotype
ENSMUSG00000022607 (Ptk2)
PTK2 protein tyrosine kinase 2 		ENSMUST00000110036 (Ptk2-201) 73205105-73423191 protein_coding
ENSMUST00000170939 (Ptk2-202) 73215557-73423191 protein_coding
ENSMUSG00000036698 (Ago2)
argonaute RISC catalytic subunit 2 		ENSMUST00000044113 (Ago2-001) 73095844-73184840 protein_coding
ENSMUSG00000068391 (Chrac1)
chromatin accessibility complex 1 		ENSMUST00000089765 (Chrac1-001) 73090392-73094075 protein_coding
ENSMUST00000134353 (Chrac1-003) 73090392-73097554 protein_coding
ENSMUST00000137698 (Chrac1-002) 73090412-73094774 retained_intron
ENSMUSG00000088005 (Gm24787)
predicted gene, 24787 		ENSMUST00000157380 (Gm24787-201) 73349799-73349921 snoRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XD_0001ENSG00000123908ENST00000220592ENST00000517293ENST00000519980ENST00000520412ENST00000523609ENSG00000169398ENST00000340930ENST00000395218ENST00000430260ENST00000517712ENST00000517887ENST00000519654ENST00000519993ENST00000520475ENST00000521059ENST00000521986ENST00000523539ENSG00000279786ENST00000623208ENSG00000280303ENST00000623655ENSG00000280326ENST00000624905CIL_0002XD_0002ENSMUSG00000022607ENSMUST00000110036ENSMUST00000170939ENSMUSG00000036698ENSMUST00000044113ENSMUSG00000068391ENSMUST00000089765ENSMUSG00000088005ENSMUST00000157380
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123908 ENST00000220592 N/A N/A 1.756±0.00 1.108±0.00 4.967±0.00 N/A 1.678±0.00 0.689±0.14 3.574±0.00 2.501±0.00 6.202±0.00 3.182±1.95 0.818±0.39 0.789±0.00
ENST00000517293 N/A N/A 5.152±0.00 N/A 16.568±0.00 N/A 8.252±0.00 5.174±0.00 N/A N/A N/A N/A N/A N/A
ENST00000518019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519980 N/A N/A 0.541±0.00 1.778±0.00 1.900±0.00 4.528±0.00 N/A N/A 0.225±0.00 N/A 4.754±1.13 0.664±0.00 0.479±0.00 0.596±0.01
ENST00000520412 N/A N/A N/A N/A N/A 3.461±0.00 N/A 1.716±0.00 1.138±0.00 N/A N/A N/A N/A N/A
ENST00000520628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523609 N/A 2.228±0.00 0.512±0.00 1.259±0.00 1.217±0.00 0.769±0.00 1.329±0.00 0.524±0.05 0.709±0.00 6.584±0.00 8.058±0.00 2.746±2.05 1.219±0.14 1.048±0.18
ENST00000524328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169398 ENST00000340930 N/A N/A N/A N/A N/A N/A 2.283±0.00 3.283±0.00 N/A N/A N/A 2.596±0.00 N/A 4.365±0.00
ENST00000395218 N/A 3.138±0.00 N/A N/A N/A 6.817±0.00 3.019±0.00 N/A N/A 4.078±0.00 2.042±0.00 4.301±0.00 5.265±1.33 N/A
ENST00000430260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.421±0.00 N/A 12.703±0.00 N/A
ENST00000510126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517712 N/A N/A N/A 9.287±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517887 N/A N/A 2.662±0.00 9.071±0.00 4.162±0.00 N/A N/A 1.797±0.00 4.165±0.00 6.839±0.00 N/A N/A N/A N/A
ENST00000518173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519654 7.324±0.00 4.911±0.00 N/A 8.067±0.00 6.326±2.63 N/A N/A 6.564±0.00 1.755±0.00 N/A N/A 4.008±0.00 6.625±0.00 8.614±0.00
ENST00000519881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519993 3.432±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.051±0.00 N/A N/A 4.298±0.00
ENST00000520045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520475 N/A N/A N/A N/A N/A 33.208±0.00 N/A N/A 57.609±0.00 N/A N/A N/A N/A N/A
ENST00000520828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521059 3.634±0.00 N/A N/A N/A N/A 6.687±0.00 3.089±0.00 N/A N/A 3.706±0.00 1.423±0.85 10.929±1.64 9.366±4.66 8.686±0.00
ENST00000521172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.727±1.85 7.497±0.00 N/A N/A
ENST00000522424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523539 N/A 8.845±0.00 N/A 19.491±0.00 N/A 6.563±0.00 3.320±0.00 N/A 2.912±0.00 4.993±0.00 N/A 4.186±0.00 N/A 6.164±0.27
ENST00000523670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279786 ENST00000623208 0.174±0.00 0.117±0.00 0.249±0.00 0.214±0.00 0.277±0.19 0.012±0.00 0.189±0.18 0.263±0.16 0.163±0.13 0.609±0.58 0.151±0.00 0.355±0.21 0.104±0.08 0.221±0.00
ENSG00000280303 ENST00000623655 0.069±0.00 0.036±0.00 N/A 0.042±0.00 N/A 0.327±0.08 0.131±0.00 0.894±0.67 N/A 0.522±0.00 N/A 0.584±0.38 0.554±0.23 0.122±0.01
ENSG00000280326 ENST00000624905 N/A N/A 0.035±0.00 0.154±0.00 N/A N/A 0.051±0.04 0.167±0.00 0.117±0.11 N/A 0.082±0.07 0.391±0.36 N/A 0.156±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022607 ENSMUST00000110036 8.384±0.69 4.252±1.12 6.954±2.51 14.392±4.21 3.853±1.19 4.916±2.21 2.519±0.44 4.928±1.43 3.409±1.46 10.675±0.19 4.443±0.79 9.820±3.59 17.411±6.17 3.995±3.20
ENSMUST00000170939 N/A N/A N/A N/A N/A N/A 0.903±0.00 N/A N/A N/A N/A 2.336±0.89 N/A 3.624±0.00
ENSMUSG00000036698 ENSMUST00000044113 8.393±2.99 9.364±0.93 4.870±2.21 6.775±2.52 7.301±4.53 10.983±3.14 5.623±0.14 7.320±0.36 6.387±3.66 9.459±1.47 6.544±0.39 7.968±3.37 7.686±3.75 3.581±0.07
ENSMUSG00000068391 ENSMUST00000089765 26.131±0.59 33.996±1.78 32.016±4.51 16.738±4.89 32.012±7.54 22.610±2.90 32.017±3.68 32.955±1.69 26.652±7.78 26.222±0.92 36.902±2.61 35.165±4.55 23.319±5.22 207.562±49.31
ENSMUST00000134353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088005 ENSMUST00000157380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.785±0.00 N/A

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