C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002Y3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146192-ENSG00000137193 CGP 9606 6:37005646-37175426
GeneTranscriptPositionBiotype
ENSG00000137193 (PIM1)
Pim-1 proto-oncogene, serine/threonine kinase 		ENST00000373509 (PIM1-003) 37170203-37175426 protein_coding
ENST00000468243 (PIM1-004) 37172468-37174247 processed_transcript
ENST00000479509 (PIM1-001) 37172494-37174312 processed_transcript
ENSG00000146192 (FGD2)
FYVE, RhoGEF and PH domain containing 2 		ENST00000274963 (FGD2-001) 37005647-37029070 protein_coding
ENST00000373535 (FGD2-003) 37005655-37028488 nonsense_mediated_decay
ENST00000459781 (FGD2-012) 37005658-37012033 retained_intron
ENST00000464083 (FGD2-006) 37005699-37028538 retained_intron
ENST00000470273 (FGD2-008) 37013234-37020717 retained_intron
ENST00000487920 (FGD2-010) 37021542-37029069 retained_intron
ENST00000487975 (FGD2-005) 37005699-37011563 retained_intron
ENST00000489356 (FGD2-002) 37005646-37010031 retained_intron
ENST00000493635 (FGD2-009) 37013502-37028546 retained_intron
ENST00000494343 (FGD2-007) 37013025-37029069 retained_intron
ENST00000497659 (FGD2-011) 37005655-37011034 nonsense_mediated_decay
ENSG00000216412 (RPL12P2)
ribosomal protein L12 pseudogene 2 		ENST00000424565 (RPL12P2-001) 37091314-37091806 processed_pseudogene
ENSG00000226976 (COX6A1P2)
cytochrome c oxidase subunit VIa polypeptide 1 pseudogene 2 		ENST00000620597 (COX6A1P2-001) 37044860-37045189 processed_pseudogene
CIL_0002Y3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024013-ENSMUSG00000024014 CGP 10090 17:29360914-29496111
GeneTranscriptPositionBiotype
ENSMUSG00000024013 (Fgd2)
FYVE, RhoGEF and PH domain containing 2 		ENSMUST00000024810 (Fgd2-001) 29360942-29379553 protein_coding
ENSMUST00000123989 (Fgd2-002) 29360914-29379660 nonsense_mediated_decay
ENSMUST00000137644 (Fgd2-005) 29368967-29374984 retained_intron
ENSMUST00000138537 (Fgd2-008) 29365437-29367961 retained_intron
ENSMUST00000140918 (Fgd2-006) 29368979-29374364 retained_intron
ENSMUST00000144616 (Fgd2-007) 29376501-29378452 processed_transcript
ENSMUST00000145124 (Fgd2-003) 29360932-29365059 processed_transcript
ENSMUST00000146800 (Fgd2-004) 29360942-29367006 retained_intron
ENSMUSG00000024014 (Pim1)
proviral integration site 1 		ENSMUST00000024811 (Pim1-001) 29490812-29496111 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Y3_0001ENSG00000137193ENST00000373509ENST00000468243ENST00000479509ENSG00000146192ENST00000274963ENST00000373535ENST00000459781ENST00000464083ENST00000470273ENST00000487920ENST00000487975ENST00000489356ENST00000493635ENST00000494343ENST00000497659ENSG00000216412ENST00000424565ENSG00000226976ENST00000620597CIL_0002Y3_0002ENSMUSG00000024013ENSMUST00000024810ENSMUST00000123989ENSMUST00000137644ENSMUST00000138537ENSMUST00000140918ENSMUST00000144616ENSMUST00000145124ENSMUST00000146800ENSMUSG00000024014ENSMUST00000024811
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Y3_0001ENSG00000137193ENST00000373509ENST00000479509ENSG00000146192ENST00000274963ENST00000373535ENST00000459781ENST00000464083ENST00000487920ENST00000487975ENST00000489356ENST00000493635ENST00000494343ENST00000497659ENSG00000216412ENST00000424565ENSG00000226976ENST00000620597CIL_0002Y3_0002ENSMUSG00000024013ENSMUST00000024810ENSMUST00000123989ENSMUST00000137644ENSMUST00000140918ENSMUST00000144616ENSMUST00000146800ENSMUSG00000024014ENSMUST00000024811
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137193 ENST00000373509 53.794±0.00 27.532±0.00 2.157±0.00 5.987±4.06 16.453±8.65 18.177±17.85 5.676±4.49 4.568±2.75 9.298±4.02 24.657±19.52 8.413±0.00 28.379±23.41 30.431±9.42 8.801±4.68
ENST00000468243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479509 N/A N/A N/A N/A N/A N/A 0.922±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000146192 ENST00000274963 1.332±0.00 11.127±0.00 N/A 1.066±0.00 0.644±0.10 0.158±0.00 1.083±0.00 2.239±0.00 0.935±0.00 3.098±0.00 N/A 0.654±0.37 3.003±1.35 0.598±0.00
ENST00000373535 0.693±0.00 N/A N/A N/A 0.549±0.00 N/A N/A N/A 1.267±0.00 1.564±0.00 0.081±0.00 N/A N/A 0.651±0.00
ENST00000459781 N/A N/A N/A N/A N/A N/A 0.722±0.00 N/A N/A N/A N/A 0.715±0.00 N/A N/A
ENST00000464083 0.553±0.00 N/A 0.062±0.00 N/A N/A N/A 0.277±0.00 N/A N/A 1.029±0.00 N/A 0.575±0.19 1.140±0.00 N/A
ENST00000470273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487920 N/A N/A N/A N/A N/A N/A N/A N/A 0.271±0.00 N/A N/A 0.307±0.00 N/A 0.198±0.00
ENST00000487975 N/A N/A 0.240±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489356 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.274±0.00 0.028±0.00 N/A N/A N/A
ENST00000493635 N/A N/A N/A 0.043±0.00 N/A N/A N/A 0.324±0.00 N/A N/A 0.029±0.00 0.092±0.04 N/A N/A
ENST00000494343 0.650±0.00 3.954±0.00 0.423±0.00 0.225±0.00 0.534±0.00 0.152±0.00 0.572±0.00 N/A 0.261±0.00 1.353±0.00 N/A N/A 1.364±0.00 N/A
ENST00000497659 N/A N/A N/A N/A N/A N/A 1.046±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000216412 ENST00000424565 N/A 0.114±0.00 N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A 0.056±0.00
ENSG00000226976 ENST00000620597 N/A 0.452±0.00 N/A 0.327±0.00 0.100±0.00 0.091±0.00 N/A 0.100±0.00 0.083±0.00 N/A N/A 0.498±0.27 N/A 0.086±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024013 ENSMUST00000024810 4.765±0.85 1.820±0.77 4.276±0.74 0.863±0.24 14.976±7.79 3.619±1.06 1.143±0.37 1.530±0.40 2.398±1.49 9.234±3.20 0.165±0.08 3.748±1.63 0.506±0.49 3.903±0.00
ENSMUST00000123989 1.340±0.00 0.462±0.05 0.710±0.12 N/A 4.010±1.14 0.931±0.08 0.284±0.00 N/A 0.573±0.26 1.837±0.12 0.140±0.00 1.202±0.00 0.196±0.03 N/A
ENSMUST00000137644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.254±0.00 N/A
ENSMUST00000138537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.268±0.00
ENSMUST00000144616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.277±0.00 N/A N/A N/A
ENSMUST00000145124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146800 3.813±0.00 N/A 2.177±0.64 N/A 8.130±2.02 N/A 0.763±0.36 N/A 1.990±0.65 N/A 0.124±0.04 1.777±0.99 0.337±0.23 N/A
ENSMUSG00000024014 ENSMUST00000024811 9.933±2.14 82.728±7.88 7.876±1.40 3.707±2.36 25.723±15.61 9.851±2.75 7.961±1.78 6.152±0.50 28.263±23.16 22.767±4.52 5.451±2.07 18.403±9.85 26.733±9.07 34.965±17.29

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