C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L12 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424565 RPL12P2-001 ENSG00000216412 9606 + 6:37091314-37091806 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastMuscleTestisENST00000424565
Transcript ID Adrenal Breast Muscle Testis
ENST00000424565 0.114±0.00 0.040±0.00 0.099±0.00 0.056±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089L CIL_00089L_0001 VISTA 6:36799205-37399713
CIL_0002Y3 CIL_0002Y3_0001 CGP 6:37005646-37175426

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 0 547
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 0 547
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 0 542
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 0 525
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 0 512
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000116168 Rpl12-ps1-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000071515 Gm7117-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000117322 Gm12038-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 5.00264e-43 178
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 1e-39 167
ENSMUST00000121669 Gm11745-001 processed_pseudogene Mus_musculus 4e-29 132

Loading