C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00033F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016519-ENSDARG00000035557 CGP 7955 5:25716227-25730741
GeneTranscriptPositionBiotype
ENSDARG00000016519 (ctdnep1a)
CTD nuclear envelope phosphatase 1a 		ENSDART00000029889 (ctdnep1a-001) 25716227-25725731 protein_coding
ENSDARG00000035557 (gabarapa)
GABA(A) receptor-associated protein a 		ENSDART00000051547 (gabarapa-001) 25728533-25730741 protein_coding
ENSDART00000124379 (gabarapa-002) 25728704-25730184 retained_intron
CIL_00033F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035781-ENSDARG00000052082 CGP 7955 7:72166993-72194082
GeneTranscriptPositionBiotype
ENSDARG00000035781 (ctdnep1b)
CTD nuclear envelope phosphatase 1b 		ENSDART00000028064 (ctdnep1b-201) 72166993-72184520 protein_coding
ENSDART00000109644 (ctdnep1b-202) 72166993-72184568 protein_coding
ENSDARG00000052082 (GABARAP (2 of 2))
GABA(A) receptor-associated protein 		ENSDART00000073861 (GABARAP (2 of 2)-201) 72187370-72194082 protein_coding
CIL_00033F_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018559-ENSMUSG00000018567 CGP 10090 11:69981156-69994951
GeneTranscriptPositionBiotype
ENSMUSG00000018559 (Ctdnep1)
CTD nuclear envelope phosphatase 1 		ENSMUST00000108593 (Ctdnep1-001) 69981156-69990601 protein_coding
ENSMUST00000131531 (Ctdnep1-002) 69984254-69989548 retained_intron
ENSMUST00000138246 (Ctdnep1-004) 69989071-69990157 retained_intron
ENSMUST00000141623 (Ctdnep1-005) 69983720-69989559 protein_coding
ENSMUST00000152226 (Ctdnep1-003) 69989091-69990402 processed_transcript
ENSMUSG00000018565 (Elp5)
elongator acetyltransferase complex subunit 5 		ENSMUST00000108594 (Elp5-001) 69968224-69981252 protein_coding
ENSMUST00000108595 (Elp5-011) 69970730-69981639 protein_coding
ENSMUST00000123701 (Elp5-002) 69968228-69980263 retained_intron
ENSMUST00000127437 (Elp5-007) 69969241-69980061 nonsense_mediated_decay
ENSMUST00000138562 (Elp5-003) 69969515-69980261 retained_intron
ENSMUST00000142788 (Elp5-010) 69968222-69980272 nonsense_mediated_decay
ENSMUST00000143175 (Elp5-009) 69980035-69980696 protein_coding
ENSMUST00000143788 (Elp5-006) 69970712-69980211 retained_intron
ENSMUST00000147437 (Elp5-004) 69975103-69982517 protein_coding
ENSMUST00000151766 (Elp5-008) 69968232-69969403 retained_intron
ENSMUSG00000018567 (Gabarap)
gamma-aminobutyric acid receptor associated protein 		ENSMUST00000018711 (Gabarap-001) 69991143-69994951 protein_coding
ENSMUST00000108592 (Gabarap-004) 69991639-69994940 protein_coding
ENSMUST00000139007 (Gabarap-003) 69991807-69992601 processed_transcript
ENSMUST00000144443 (Gabarap-002) 69991684-69994935 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033F_0001ENSDARG00000016519ENSDART00000029889ENSDARG00000035557ENSDART00000051547ENSDART00000124379CIL_00033F_0002ENSDARG00000035781ENSDART00000028064ENSDART00000109644ENSDARG00000052082ENSDART00000073861CIL_00033F_0003ENSMUSG00000018559ENSMUST00000108593ENSMUST00000131531ENSMUST00000138246ENSMUST00000141623ENSMUST00000152226ENSMUSG00000018565ENSMUST00000108594ENSMUST00000108595ENSMUST00000123701ENSMUST00000127437ENSMUST00000138562ENSMUST00000142788ENSMUST00000143175ENSMUST00000143788ENSMUST00000147437ENSMUST00000151766ENSMUSG00000018567ENSMUST00000018711ENSMUST00000108592ENSMUST00000139007ENSMUST00000144443
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033F_0001ENSDARG00000016519ENSDART00000029889ENSDARG00000035557ENSDART00000051547CIL_00033F_0002ENSDARG00000035781ENSDART00000028064ENSDART00000109644ENSDARG00000052082ENSDART00000073861CIL_00033F_0003ENSMUSG00000018559ENSMUST00000108593ENSMUST00000141623ENSMUST00000152226ENSMUSG00000018565ENSMUST00000108594ENSMUST00000123701ENSMUST00000142788ENSMUST00000151766ENSMUSG00000018567ENSMUST00000018711ENSMUST00000108592ENSMUST00000144443
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016519 ENSDART00000029889 N/A N/A N/A 5.327±1.06 N/A N/A 2.475±1.48 5.515±0.38 0.427±0.00 N/A 1.686±0.00 N/A N/A N/A
ENSDARG00000035557 ENSDART00000051547 N/A N/A N/A 114.615±36.09 N/A N/A 127.243±68.29 61.588±25.83 1.888±0.00 N/A 28.590±0.00 N/A N/A N/A
ENSDART00000124379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035781 ENSDART00000028064 N/A N/A N/A 1.506±1.06 N/A N/A 4.430±0.00 6.084±2.20 N/A N/A N/A N/A N/A N/A
ENSDART00000109644 N/A N/A N/A 2.331±1.66 N/A N/A 4.185±1.87 N/A 1.639±0.00 N/A 3.939±0.00 N/A N/A N/A
ENSDARG00000052082 ENSDART00000073861 N/A N/A N/A N/A N/A N/A N/A 2.752±0.23 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018559 ENSMUST00000108593 47.743±6.80 42.683±11.04 34.738±3.52 46.109±2.68 41.426±11.36 47.592±9.38 46.717±7.14 37.236±2.23 20.538±6.00 42.971±6.62 90.802±10.42 39.924±13.07 31.232±6.45 38.237±1.31
ENSMUST00000131531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141623 N/A N/A N/A N/A 63.535±0.00 N/A N/A N/A N/A N/A N/A 33.268±6.80 38.680±4.96 N/A
ENSMUST00000152226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.103±0.00 N/A N/A
ENSMUSG00000018565 ENSMUST00000108594 12.965±0.77 N/A 20.069±2.36 23.550±10.37 9.956±0.00 N/A 15.222±2.66 13.183±2.16 18.650±9.11 12.337±0.08 15.854±0.42 11.409±3.19 15.175±4.85 53.587±27.57
ENSMUST00000108595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123701 28.666±3.85 N/A N/A 18.560±3.66 26.156±1.87 19.861±2.36 10.377±0.00 14.017±2.46 10.004±2.27 13.783±2.62 N/A 21.537±5.37 23.854±1.41 26.408±2.24
ENSMUST00000127437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.287±0.00 N/A
ENSMUST00000143175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151766 N/A N/A N/A 86.187±0.00 N/A N/A N/A N/A N/A N/A N/A 75.071±0.00 126.647±22.49 145.749±0.00
ENSMUSG00000018567 ENSMUST00000018711 41.178±14.87 9.288±0.38 68.835±2.69 39.563±23.08 29.826±12.42 17.506±3.73 25.499±3.77 34.951±4.15 34.810±18.33 17.654±1.33 50.709±4.06 23.856±7.49 42.822±20.25 58.351±23.92
ENSMUST00000108592 133.797±24.52 187.435±41.65 98.028±32.14 72.169±43.97 221.531±87.78 122.999±26.90 150.512±6.23 298.477±71.62 137.928±75.90 189.013±48.04 52.793±6.11 167.576±70.57 83.155±44.47 190.881±93.06
ENSMUST00000139007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144443 92.301±25.08 20.467±3.83 47.633±0.79 70.003±35.44 66.356±37.01 35.678±11.24 35.262±2.54 74.104±15.97 37.456±10.57 55.802±8.09 16.471±0.00 76.280±24.31 31.129±10.35 51.655±14.54

Loading