C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003N0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156304-ENSG00000142149 CGP 9606 21:31671033-32044633
GeneTranscriptPositionBiotype
ENSG00000142149 (HUNK)
hormonally up-regulated Neu-associated kinase 		ENST00000270112 (HUNK-001) 31873315-32004064 protein_coding
ENST00000430354 (HUNK-002) 31924552-31968334 protein_coding
ENST00000439107 (HUNK-004) 31974703-32044633 protein_coding
ENST00000465574 (HUNK-003) 31974178-31995927 processed_transcript
ENSG00000156304 (SCAF4)
SR-related CTD-associated factor 4 		ENST00000286835 (SCAF4-001) 31671033-31732075 protein_coding
ENST00000399804 (SCAF4-002) 31671033-31732075 protein_coding
ENST00000434667 (SCAF4-010) 31671228-31731968 protein_coding
ENST00000467731 (SCAF4-003) 31683995-31701823 retained_intron
ENST00000472318 (SCAF4-005) 31690821-31693330 retained_intron
ENST00000485790 (SCAF4-004) 31700759-31731961 retained_intron
ENSG00000229046 (HMGN1P2)
high mobility group nucleosome binding domain 1 pseudogene 2 		ENST00000445197 (HMGN1P2-001) 31706555-31706864 processed_pseudogene
ENSG00000234107 (TPT1P1)
tumor protein, translationally-controlled 1 pseudogene 1 		ENST00000458495 (TPT1P1-001) 31840341-31840858 processed_pseudogene
ENSG00000237138 (HUNK-AS1)
HUNK antisense RNA 1 		ENST00000437109 (HUNK-AS1-001) 32020966-32021782 antisense
ENSG00000273091 (AP000255.6)
 ENST00000610276 (AP000255.6-001) 31735732-31736407 lincRNA
CIL_0003N0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022983-ENSMUSG00000053414 CGP 10090 16:90228957-90499553
GeneTranscriptPositionBiotype
ENSMUSG00000022983 (Scaf4)
SR-related CTD-associated factor 4 		ENSMUST00000039280 (Scaf4-201) 90229156-90284425 protein_coding
ENSMUST00000163419 (Scaf4-202) 90228957-90284308 protein_coding
ENSMUSG00000053414 (Hunk)
hormonally upregulated Neu-associated kinase 		ENSMUST00000065856 (Hunk-201) 90386397-90499553 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003N0_0001ENSG00000142149ENST00000270112ENST00000430354ENST00000439107ENST00000465574ENSG00000156304ENST00000286835ENST00000399804ENST00000434667ENST00000467731ENST00000472318ENST00000485790ENSG00000229046ENST00000445197ENSG00000234107ENST00000458495ENSG00000237138ENST00000437109ENSG00000273091ENST00000610276CIL_0003N0_0002ENSMUSG00000022983ENSMUST00000039280ENSMUST00000163419ENSMUSG00000053414ENSMUST00000065856
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003N0_0001ENSG00000142149ENST00000270112ENST00000430354ENST00000439107ENST00000465574ENSG00000156304ENST00000286835ENST00000399804ENST00000434667ENST00000467731ENST00000485790ENSG00000229046ENST00000445197ENSG00000234107ENST00000458495ENSG00000237138ENST00000437109ENSG00000273091ENST00000610276CIL_0003N0_0002ENSMUSG00000022983ENSMUST00000039280ENSMUST00000163419ENSMUSG00000053414ENSMUST00000065856
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142149 ENST00000270112 N/A 0.271±0.00 0.639±0.00 1.303±0.19 0.353±0.29 0.550±0.14 0.017±0.00 2.236±0.00 0.319±0.16 0.222±0.17 N/A 0.428±0.14 1.888±0.89 0.582±0.00
ENST00000430354 N/A N/A N/A N/A 1.738±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439107 N/A N/A N/A N/A N/A N/A N/A 0.363±0.00 N/A 0.431±0.00 N/A N/A N/A N/A
ENST00000465574 N/A N/A N/A N/A N/A N/A N/A 0.288±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000156304 ENST00000286835 N/A N/A 1.599±0.00 N/A N/A N/A N/A N/A 1.928±0.00 2.227±0.00 4.195±0.00 1.759±0.00 N/A N/A
ENST00000399804 2.897±0.00 4.441±0.00 N/A 0.582±0.00 1.688±0.85 1.650±0.00 N/A 0.384±0.00 2.267±0.00 0.746±0.00 N/A 4.175±2.73 3.075±0.70 6.123±1.31
ENST00000434667 5.709±0.00 6.978±0.00 N/A 6.258±0.00 4.702±0.00 3.331±2.16 2.839±0.00 3.441±1.56 1.122±0.57 6.205±0.00 2.741±0.00 4.790±2.29 4.695±1.57 14.269±3.25
ENST00000467731 N/A N/A 0.894±0.00 0.182±0.00 N/A 1.384±0.00 N/A N/A N/A 2.315±0.00 1.411±0.00 1.267±0.00 N/A N/A
ENST00000472318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485790 N/A N/A N/A 0.582±0.00 N/A N/A N/A N/A N/A N/A 2.722±0.00 N/A N/A N/A
ENSG00000229046 ENST00000445197 N/A 0.193±0.00 N/A N/A 2.088±0.00 N/A N/A N/A 1.490±1.45 N/A N/A 0.793±0.16 N/A N/A
ENSG00000234107 ENST00000458495 0.120±0.00 N/A N/A 0.296±0.00 0.150±0.00 0.047±0.00 0.023±0.00 N/A N/A 0.023±0.00 N/A 0.085±0.00 N/A N/A
ENSG00000237138 ENST00000437109 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.585±0.00 N/A N/A N/A 0.085±0.00
ENSG00000273091 ENST00000610276 0.183±0.00 0.886±0.00 N/A 0.474±0.16 0.223±0.00 0.125±0.07 0.062±0.02 0.147±0.00 0.058±0.00 0.054±0.00 N/A 0.164±0.06 0.151±0.00 0.455±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022983 ENSMUST00000039280 4.672±1.38 20.345±1.77 4.790±0.49 7.534±3.00 12.904±6.45 11.581±1.47 1.895±0.61 3.854±1.67 4.606±2.58 9.478±3.43 1.183±0.17 15.383±5.11 5.804±1.73 10.737±3.57
ENSMUST00000163419 3.871±0.68 4.189±0.64 3.269±0.04 5.873±1.38 4.087±0.11 2.394±0.56 1.431±0.22 2.208±0.61 2.529±1.04 2.480±0.67 1.380±0.47 7.557±4.38 8.401±3.87 6.530±1.32
ENSMUSG00000053414 ENSMUST00000065856 1.121±0.96 1.378±0.15 1.648±0.04 6.423±1.69 0.437±0.09 3.552±0.65 0.191±0.08 0.901±0.31 0.563±0.34 1.535±0.86 0.117±0.03 2.819±0.47 5.410±3.42 1.258±0.87

Loading