C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441577 RP11-560I19.2-001 ENSG00000213302 9606 + 7:122234531-122234903 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungMuscleTestisENST00000441577
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Muscle Testis
ENST00000441577 0.079±0.00 0.042±0.00 0.044±0.00 0.042±0.00 0.079±0.00 0.038±0.00 0.040±0.00 0.223±0.00 0.067±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083M CIL_00083M_0001 VISTA 7:122027474-122631024
CIL_0003QN CIL_0003QN_0001 CGP 7:122075647-122310691

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086596 Rpl31-ps9-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000119898 Rpl31-ps11-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000181935 Rpl31-ps8-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000179954 Rpl31-203 protein_coding Mus_musculus 0 396
ENSMUST00000178079 Rpl31-202 protein_coding Mus_musculus 0 396
ENSMUST00000086535 Rpl31-201 protein_coding Mus_musculus 0 396
ENSMUST00000119957 Rpl31-ps12-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000143596 Rpl31-ps14-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000097040 Rpl31-ps17-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000181130 Rpl31-ps16-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000181857 Rpl31-ps15-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000085128 Rpl31-ps1-201 processed_pseudogene Mus_musculus 0 351
ENSMUST00000180629 Rpl31-ps7-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000079114 Rpl31-ps4-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000180885 Rpl31-ps18-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000181350 Rpl31-ps24-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000117961 Rpl31-ps22-001 processed_pseudogene Mus_musculus 0 267

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