C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis associated 1 family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000127454 mta3-001 ENSDARG00000054903 7955 + 12:26751525-26794783 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000127454
Transcript ID Brain Heart Kidney Muscle
ENSDART00000127454 3.381±0.00 5.776±1.61 3.165±3.12 1.572±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TA CIL_0003TA_0001 CGP 12:26737021-26812162
CIL_0003T7 CIL_0003T7_0001 CGP 12:26751451-26822421

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043565 IEA sequence-specific DNA binding
GO:0060215 IDA primitive hemopoiesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067826 Mta3-001 protein_coding Mus_musculus 0 610
ENSMUST00000112349 Mta3-005 protein_coding Mus_musculus 0 638
ENSMUST00000112350 Mta3-002 protein_coding Mus_musculus 0 628
ENSMUST00000112352 Mta3-004 protein_coding Mus_musculus 0 628
ENSMUST00000177069 Mta3-003 nonsense_mediated_decay Mus_musculus 0.0000002 62
ENST00000331320 MTA1-001 protein_coding Homo_sapiens 0 444
ENST00000405094 MTA3-017 protein_coding Homo_sapiens 0 453
ENST00000405646 MTA1-003 protein_coding Homo_sapiens 0 569
ENST00000406191 MTA1-002 protein_coding Homo_sapiens 0 444
ENST00000406911 MTA3-003 protein_coding Homo_sapiens 0 457
ENST00000407270 MTA3-002 protein_coding Homo_sapiens 0 460
ENST00000409019 MTA3-018 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000430763 MTA3-010 nonsense_mediated_decay Homo_sapiens 6e-29 132
ENST00000434050 MTA1-007 protein_coding Homo_sapiens 0 381
ENST00000435036 MTA1-201 protein_coding Homo_sapiens 0 444
ENST00000438610 MTA1-004 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000454356 MTA3-004 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000481012 MTA1-009 retained_intron Homo_sapiens 0 285
ENST00000490198 MTA1-010 retained_intron Homo_sapiens 0 200

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