C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003V3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000203883-ENSG00000171703 CGP 9606 20:64047582-64072347
GeneTranscriptPositionBiotype
ENSG00000171703 (TCEA2)
transcription elongation factor A (SII), 2 		ENST00000339217 (TCEA2-003) 64063237-64070635 protein_coding
ENST00000343484 (TCEA2-001) 64063144-64072346 protein_coding
ENST00000361317 (TCEA2-008) 64057293-64072346 protein_coding
ENST00000395053 (TCEA2-201) 64063158-64072346 protein_coding
ENST00000415602 (TCEA2-009) 64063481-64068134 protein_coding
ENST00000440819 (TCEA2-004) 64064087-64070635 protein_coding
ENST00000458442 (TCEA2-002) 64066211-64071941 protein_coding
ENST00000461072 (TCEA2-006) 64070291-64072346 processed_transcript
ENST00000465111 (TCEA2-005) 64065550-64072345 processed_transcript
ENST00000465433 (TCEA2-015) 64069464-64072347 processed_transcript
ENST00000470559 (TCEA2-012) 64064326-64069372 processed_transcript
ENST00000475236 (TCEA2-016) 64070328-64072346 processed_transcript
ENST00000475792 (TCEA2-010) 64049836-64062867 processed_transcript
ENST00000476113 (TCEA2-007) 64063196-64064123 processed_transcript
ENST00000477783 (TCEA2-014) 64069765-64072347 processed_transcript
ENST00000487164 (TCEA2-011) 64063158-64070209 processed_transcript
ENST00000495168 (TCEA2-013) 64070214-64072347 processed_transcript
ENSG00000196700 (ZNF512B)
zinc finger protein 512B 		ENST00000217130 (ZNF512B-201) 63959644-64038583 protein_coding
ENST00000369888 (ZNF512B-001) 63956702-63969865 protein_coding
ENST00000450537 (ZNF512B-202) 63956705-64048758 protein_coding
ENSG00000203883 (SOX18)
SRY (sex determining region Y)-box 18 		ENST00000340356 (SOX18-001) 64047582-64049641 protein_coding
ENSG00000237371 (RP13-152O15.5)
 ENST00000455524 (RP13-152O15.5-001) 64056803-64057084 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0003V3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046470-ENSMUSG00000059540 CGP 10090 2:181669836-181688071
GeneTranscriptPositionBiotype
ENSMUSG00000046470 (Sox18)
SRY (sex determining region Y)-box 18 		ENSMUST00000054491 (Sox18-001) 181669836-181671640 protein_coding
ENSMUSG00000059540 (Tcea2)
transcription elongation factor A (SII), 2 		ENSMUST00000103042 (Tcea2-001) 181680310-181688071 protein_coding
ENSMUST00000125892 (Tcea2-006) 181683601-181686934 retained_intron
ENSMUST00000126623 (Tcea2-005) 181683166-181686292 processed_transcript
ENSMUST00000126844 (Tcea2-008) 181687516-181688062 processed_transcript
ENSMUST00000129006 (Tcea2-004) 181682885-181688045 protein_coding
ENSMUST00000129686 (Tcea2-002) 181680310-181687347 retained_intron
ENSMUST00000129745 (Tcea2-003) 181681190-181688051 protein_coding
ENSMUST00000136145 (Tcea2-007) 181683575-181687911 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003V3_0001ENSG00000171703ENST00000339217ENST00000343484ENST00000361317ENST00000395053ENST00000415602ENST00000440819ENST00000458442ENST00000461072ENST00000465111ENST00000465433ENST00000470559ENST00000475236ENST00000475792ENST00000476113ENST00000477783ENST00000487164ENST00000495168ENSG00000196700ENST00000217130ENST00000369888ENST00000450537ENSG00000203883ENST00000340356ENSG00000237371ENST00000455524CIL_0003V3_0002ENSMUSG00000046470ENSMUST00000054491ENSMUSG00000059540ENSMUST00000103042ENSMUST00000125892ENSMUST00000126623ENSMUST00000126844ENSMUST00000129006ENSMUST00000129686ENSMUST00000129745ENSMUST00000136145
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003V3_0001ENSG00000171703ENST00000339217ENST00000343484ENST00000361317ENST00000415602ENST00000440819ENST00000458442ENST00000465111ENST00000465433ENST00000475236ENST00000476113ENST00000477783ENST00000487164ENST00000495168ENSG00000196700ENST00000217130ENST00000369888ENST00000450537ENSG00000203883ENST00000340356ENSG00000237371ENST00000455524CIL_0003V3_0002ENSMUSG00000046470ENSMUST00000054491ENSMUSG00000059540ENSMUST00000103042ENSMUST00000125892ENSMUST00000126623ENSMUST00000126844ENSMUST00000129006ENSMUST00000129686ENSMUST00000129745ENSMUST00000136145
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171703 ENST00000339217 N/A N/A N/A N/A N/A N/A N/A 1.908±0.00 N/A N/A N/A N/A N/A N/A
ENST00000343484 3.017±0.00 10.589±0.00 0.912±0.00 38.502±32.56 4.007±0.00 14.993±0.00 3.312±0.00 9.038±7.47 1.354±0.00 4.398±3.80 1.646±1.18 19.079±16.01 12.617±1.74 75.323±8.76
ENST00000361317 2.265±0.00 N/A 0.219±0.00 1.189±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415602 6.308±0.00 N/A N/A N/A N/A 9.548±0.00 N/A 12.286±0.00 N/A N/A N/A N/A N/A N/A
ENST00000440819 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.605±0.00 N/A N/A N/A N/A
ENST00000458442 N/A N/A N/A N/A 0.126±0.00 N/A 0.244±0.00 4.858±0.00 N/A N/A N/A N/A N/A N/A
ENST00000461072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465111 N/A N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A 0.329±0.00 N/A 0.134±0.00 N/A N/A
ENST00000465433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.404±0.00 N/A 41.230±0.00
ENST00000470559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475236 N/A N/A N/A 3.170±0.00 N/A N/A N/A N/A 1.227±0.00 N/A N/A N/A N/A N/A
ENST00000475792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476113 10.302±0.00 N/A N/A N/A 18.786±0.00 8.913±7.47 10.640±0.00 N/A 2.939±1.26 21.823±0.00 7.212±0.00 0.803±0.00 17.185±0.00 N/A
ENST00000477783 N/A N/A N/A N/A N/A 0.249±0.00 N/A N/A N/A N/A 3.284±0.00 7.153±0.00 5.277±0.00 34.493±0.00
ENST00000487164 N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000495168 N/A N/A N/A N/A 1.208±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196700 ENST00000217130 N/A N/A 0.477±0.00 0.696±0.00 N/A N/A N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A
ENST00000369888 N/A N/A N/A N/A 4.776±0.00 N/A 0.202±0.00 1.170±0.00 N/A N/A N/A 7.541±3.61 6.393±0.50 4.301±0.00
ENST00000450537 3.207±0.00 7.192±0.00 N/A 4.732±0.00 N/A 2.002±0.00 4.034±0.00 3.081±0.00 1.537±0.00 2.796±0.00 3.029±0.00 7.547±0.00 N/A 1.636±0.00
ENSG00000203883 ENST00000340356 15.331±0.00 37.997±0.00 N/A 7.367±0.00 23.960±0.00 7.986±0.00 24.752±0.00 11.333±0.00 3.750±0.00 32.167±0.00 22.042±0.00 26.191±0.00 25.443±3.56 9.440±0.00
ENSG00000237371 ENST00000455524 1.145±0.00 1.231±0.00 N/A N/A 1.015±0.00 N/A N/A 0.191±0.00 N/A N/A N/A 1.822±2.05 0.809±0.00 0.800±0.30
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046470 ENSMUST00000054491 56.696±16.13 47.659±10.21 13.532±1.23 8.139±2.56 42.801±13.25 12.623±0.77 34.991±8.07 22.924±1.58 4.204±1.83 146.071±8.68 6.896±1.65 53.204±19.03 6.674±1.48 2.041±0.86
ENSMUSG00000059540 ENSMUST00000103042 2.959±1.18 1.378±0.25 7.151±1.22 13.471±0.53 1.261±0.15 0.856±0.26 1.975±0.29 1.990±0.36 0.901±0.47 1.810±0.19 1.881±0.65 3.650±0.89 0.812±0.44 247.280±52.65
ENSMUST00000125892 N/A N/A N/A 7.008±0.00 N/A N/A N/A N/A N/A N/A N/A 2.171±0.00 0.307±0.06 N/A
ENSMUST00000126623 N/A N/A N/A N/A N/A N/A N/A N/A 0.412±0.00 N/A N/A N/A N/A N/A
ENSMUST00000126844 N/A 7.176±0.00 N/A N/A N/A N/A N/A N/A 1.212±0.00 N/A N/A N/A N/A N/A
ENSMUST00000129006 0.982±0.00 N/A N/A N/A N/A N/A 1.016±0.00 1.386±0.01 0.620±0.00 1.340±0.06 N/A 3.744±0.79 N/A N/A
ENSMUST00000129686 1.539±0.62 0.530±0.01 1.711±0.05 4.676±1.53 0.693±0.10 0.477±0.09 0.466±0.00 0.593±0.07 0.189±0.13 1.852±0.18 0.367±0.00 1.168±0.27 0.245±0.16 N/A
ENSMUST00000129745 2.335±0.99 N/A N/A N/A 2.103±0.36 N/A N/A 1.435±0.26 0.228±0.00 2.494±0.00 0.960±0.00 3.052±0.15 0.412±0.00 N/A
ENSMUST00000136145 1.385±0.00 2.049±0.81 2.292±0.00 5.083±1.85 N/A 1.340±0.07 0.889±0.00 1.098±0.00 0.751±0.30 1.629±0.04 0.771±0.10 6.338±1.81 0.505±0.12 N/A

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