C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000409_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000189060-ENSG00000100116 CGP 9606 22:37805093-37817176
GeneTranscriptPositionBiotype
ENSG00000100116 (GCAT)
glycine C-acetyltransferase 		ENST00000248924 (GCAT-001) 37807912-37816899 protein_coding
ENST00000323205 (GCAT-002) 37807905-37817176 protein_coding
ENST00000415371 (GCAT-005) 37807923-37813485 processed_transcript
ENST00000426858 (GCAT-006) 37807938-37815208 nonsense_mediated_decay
ENST00000445195 (GCAT-004) 37807916-37813300 protein_coding
ENST00000451984 (GCAT-003) 37808014-37813609 protein_coding
ENST00000478203 (GCAT-007) 37807934-37813076 retained_intron
ENSG00000189060 (H1F0)
H1 histone family, member 0 		ENST00000340857 (H1F0-001) 37805093-37807436 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_000409_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000096210-ENSMUSG00000006378 CGP 10090 15:79028212-79043558
GeneTranscriptPositionBiotype
ENSMUSG00000006378 (Gcat)
glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase) 		ENSMUST00000006544 (Gcat-201) 79030874-79038348 protein_coding
ENSMUST00000058004 (Gcat-202) 79041885-79043558 protein_coding
ENSMUST00000171999 (Gcat-203) 79030874-79042531 protein_coding
ENSMUSG00000096210 (H1f0)
H1 histone family, member 0 		ENSMUST00000180086 (H1f0-201) 79028212-79030498 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000409_0001ENSG00000100116ENST00000248924ENST00000323205ENST00000415371ENST00000426858ENST00000445195ENST00000451984ENST00000478203ENSG00000189060ENST00000340857CIL_000409_0002ENSMUSG00000006378ENSMUST00000006544ENSMUST00000058004ENSMUST00000171999ENSMUSG00000096210ENSMUST00000180086
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000409_0001ENSG00000100116ENST00000248924ENST00000323205ENST00000426858ENST00000445195ENSG00000189060ENST00000340857CIL_000409_0002ENSMUSG00000006378ENSMUST00000006544ENSMUST00000171999ENSMUSG00000096210ENSMUST00000180086
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100116 ENST00000248924 3.839±0.00 1.959±0.00 2.206±0.00 7.173±2.91 1.408±1.07 2.768±2.04 4.508±2.42 8.478±0.82 5.950±4.69 1.550±0.85 5.924±1.24 8.955±2.61 3.138±1.31 6.512±0.17
ENST00000323205 1.083±0.00 1.045±0.00 N/A N/A 0.552±0.00 N/A 2.026±0.00 2.299±0.00 N/A N/A N/A 1.009±0.00 0.745±0.00 0.994±0.00
ENST00000415371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426858 N/A N/A N/A N/A N/A 0.708±0.00 N/A N/A N/A N/A N/A N/A N/A 3.898±0.00
ENST00000445195 N/A N/A N/A N/A N/A 0.405±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189060 ENST00000340857 52.661±0.00 108.612±0.00 5.669±0.00 31.136±24.95 29.797±21.24 33.910±26.99 26.621±23.91 48.322±29.25 43.652±40.00 20.410±18.05 22.084±12.27 84.906±63.91 49.651±10.69 41.802±11.97
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006378 ENSMUST00000006544 3.438±0.40 5.930±0.60 3.459±0.02 2.255±0.64 2.907±0.91 3.602±1.21 2.996±0.26 25.103±1.49 24.751±5.93 2.232±0.38 2.729±0.38 2.615±0.83 15.448±17.96 0.846±0.33
ENSMUST00000058004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171999 8.860±1.95 21.337±4.56 2.849±1.32 2.055±1.25 9.594±4.45 11.029±1.72 3.830±0.22 42.708±7.88 54.477±31.09 6.989±0.49 1.072±0.36 7.234±1.77 24.754±23.28 1.401±0.31
ENSMUSG00000096210 ENSMUST00000180086 46.266±13.30 82.681±15.21 46.720±3.53 68.556±42.80 44.704±16.39 136.204±17.86 25.901±2.52 70.903±8.41 53.175±15.44 56.944±7.21 49.090±1.99 79.929±26.78 55.851±18.52 5.011±2.13

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