C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_000439_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000163359-ENSG00000115648 | CGP | 9606 | 2:237324003-237555318  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000115648  (MLPH)melanophilin |
ENST00000264605 (MLPH-001)
|
237487168-237555318 | protein_coding | |
|
ENST00000338530 (MLPH-004)
|
237487251-237553994 | protein_coding | ||
|
ENST00000409373 (MLPH-005)
|
237487276-237553994 | protein_coding | ||
|
ENST00000410032 (MLPH-002)
|
237486410-237553996 | protein_coding | ||
|
ENST00000415753 (MLPH-019)
|
237527435-237553724 | protein_coding | ||
|
ENST00000422695 (MLPH-009)
|
237485428-237511050 | protein_coding | ||
|
ENST00000429898 (MLPH-010)
|
237486409-237510674 | protein_coding | ||
|
ENST00000432475 (MLPH-020)
|
237540449-237553722 | nonsense_mediated_decay | ||
|
ENST00000434770 (MLPH-022)
|
237540865-237553991 | protein_coding | ||
|
ENST00000436965 (MLPH-018)
|
237525728-237540959 | protein_coding | ||
|
ENST00000437893 (MLPH-008)
|
237519935-237553956 | protein_coding | ||
|
ENST00000464123 (MLPH-007)
|
237518029-237553991 | retained_intron | ||
|
ENST00000468178 (MLPH-003)
|
237487251-237545769 | processed_transcript | ||
|
ENST00000469619 (MLPH-012)
|
237487275-237511622 | retained_intron | ||
|
ENST00000477222 (MLPH-011)
|
237487251-237510711 | processed_transcript | ||
|
ENST00000477457 (MLPH-021)
|
237546405-237553843 | retained_intron | ||
|
ENST00000477501 (MLPH-013)
|
237510070-237518572 | processed_transcript | ||
|
ENST00000478712 (MLPH-014)
|
237518295-237552437 | retained_intron | ||
|
ENST00000482528 (MLPH-017)
|
237525674-237527683 | retained_intron | ||
|
ENST00000485956 (MLPH-016)
|
237519979-237537725 | processed_transcript | ||
|
ENST00000489967 (MLPH-023)
|
237552027-237553811 | retained_intron | ||
|
ENST00000494110 (MLPH-015)
|
237518414-237540446 | retained_intron | ||
|
ENST00000495439 (MLPH-006)
|
237510087-237553993 | retained_intron | ||
|
ENSG00000163359 (COL6A3) collagen, type VI, alpha 3 |
ENST00000295550 (COL6A3-001)
|
237324012-237414375 | protein_coding | |
|
ENST00000347401 (COL6A3-201)
|
237324085-237414148 | protein_coding | ||
|
ENST00000353578 (COL6A3-202)
|
237324012-237414207 | protein_coding | ||
|
ENST00000392003 (COL6A3-003)
|
237371617-237414207 | protein_coding | ||
|
ENST00000392004 (COL6A3-002)
|
237371617-237414177 | protein_coding | ||
|
ENST00000409809 (COL6A3-011)
|
237324774-237396817 | protein_coding | ||
|
ENST00000433762 (COL6A3-008)
|
237377118-237414177 | protein_coding | ||
|
ENST00000468792 (COL6A3-010)
|
237338940-237340602 | retained_intron | ||
|
ENST00000472056 (COL6A3-012)
|
237324085-237414148 | protein_coding | ||
|
ENST00000473258 (COL6A3-005)
|
237324003-237330180 | processed_transcript | ||
|
ENST00000491233 (COL6A3-004)
|
237386454-237388077 | protein_coding | ||
|
ENST00000491769 (COL6A3-009)
|
237324019-237355779 | retained_intron | ||
|
ENST00000493475 (COL6A3-007)
|
237356790-237357883 | retained_intron | ||
|
ENST00000493608 (COL6A3-006)
|
237332968-237334786 | processed_transcript | ||
|
ENSG00000222022 (AC112721.1) |
ENST00000409162 (AC112721.1-001)
|
237421420-237425276 | lincRNA | |
|
ENSG00000222032 (AC112721.2) |
ENST00000409910 (AC112721.2-001)
|
237428920-237434822 | lincRNA | |
| CIL_000439_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000048126-ENSMUSG00000026303 | CGP | 10090 | 1:90765923-90951142 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000026303 (Mlph) melanophilin |
ENSMUST00000027528 (Mlph-001)
|
90915085-90951142 | protein_coding | |
|
ENSMUST00000125149 (Mlph-002)
|
90927679-90928432 | protein_coding | ||
|
ENSMUST00000136220 (Mlph-003)
|
90939169-90940239 | retained_intron | ||
|
ENSMUSG00000048126 (Col6a3) collagen, type VI, alpha 3 |
ENSMUST00000056925 (Col6a3-201)
|
90765923-90843971 | protein_coding | |
|
ENSMUST00000097653 (Col6a3-001)
|
90766860-90843952 | protein_coding | ||
|
ENSMUST00000130846 (Col6a3-002)
|
90802473-90843928 | protein_coding | ||
|
ENSMUST00000136916 (Col6a3-004)
|
90791467-90807982 | retained_intron | ||
|
ENSMUST00000145750 (Col6a3-003)
|
90793892-90794721 | retained_intron | ||
|
ENSMUST00000150769 (Col6a3-005)
|
90767389-90773215 | retained_intron | ||
|
ENSMUST00000187753 (Col6a3-006)
|
90822271-90843971 | protein_coding | ||
|
ENSMUST00000188587 (Col6a3-202)
|
90765923-90843971 | protein_coding | ||
Expression Patterns
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