C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | vimentin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000478317  |
VIM-004 |
ENSG00000026025 |
9606 | + |
10:17228259-17229950  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00046B | CIL_00046B_0002 | CGP | 10:17142254-17237593 |
| CIL_0005AO | CIL_0005AO_0001 | CGP | 10:17228259-17454330 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000155605
|
Vim-002 | retained_intron | Mus_musculus | 0 | 715 |
|
ENSMUST00000028062
|
Vim-001 | protein_coding | Mus_musculus | 0 | 715 |
|
ENSMUST00000141365
|
Vim-003 | protein_coding | Mus_musculus | 0 | 527 |
|
ENSMUST00000100179
|
Krt76-001 | protein_coding | Mus_musculus | 0.0000000006 | 69 |
|
ENSMUST00000023952
|
Krt8-201 | protein_coding | Mus_musculus | 0.000000002 | 68 |
|
ENSMUST00000088049
|
Krt86-201 | protein_coding | Mus_musculus | 0.00000003 | 64 |
|
ENSMUST00000081945
|
Krt83-201 | protein_coding | Mus_musculus | 0.00000003 | 64 |
|
ENSMUST00000061185
|
Krt81-201 | protein_coding | Mus_musculus | 0.00000003 | 64 |
|
ENSMUST00000023718
|
5430421N21Rik-001 | protein_coding | Mus_musculus | 0.00000003 | 64 |
