C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vimentin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478317 VIM-004 ENSG00000026025 9606 + 10:17228259-17229950 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046B CIL_00046B_0002 CGP 10:17142254-17237593
CIL_0005AO CIL_0005AO_0001 CGP 10:17228259-17454330

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155605 Vim-002 retained_intron Mus_musculus 0 715
ENSMUST00000028062 Vim-001 protein_coding Mus_musculus 0 715
ENSMUST00000141365 Vim-003 protein_coding Mus_musculus 0 527
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0.0000000006 69
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0.000000002 68
ENSMUST00000088049 Krt86-201 protein_coding Mus_musculus 0.00000003 64
ENSMUST00000081945 Krt83-201 protein_coding Mus_musculus 0.00000003 64
ENSMUST00000061185 Krt81-201 protein_coding Mus_musculus 0.00000003 64
ENSMUST00000023718 5430421N21Rik-001 protein_coding Mus_musculus 0.00000003 64

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