Transcript Info |
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Description: | vimentin | |||||
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Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000544301 | VIM-201 | ENSG00000026025 | 9606 | + | 10:17228259-17237585 | protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
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Region ID | Sub-Region | Region Type | Position |
CIL_00046B | CIL_00046B_0002 | CGP | 10:17142254-17237593 |
CIL_0005AO | CIL_0005AO_0001 | CGP | 10:17228259-17454330 |
Gene Ontology | ||
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GO ID | Evidence Type | GO Description |
GO:0001948 | IPI | glycoprotein binding |
GO:0003725 | IDA | double-stranded RNA binding |
GO:0005198 | IEA | structural molecule activity |
GO:0005200 | IDA | structural constituent of cytoskeleton |
GO:0005212 | IEA | structural constituent of eye lens |
GO:0005515 | IPI | protein binding |
GO:0005737 | IDA | cytoplasm |
GO:0005777 | IDA | peroxisome |
GO:0005829 | IDA | cytosol |
GO:0005856 | TAS | cytoskeleton |
GO:0005882 | IDA:IEA | intermediate filament |
GO:0005886 | IDA | plasma membrane |
GO:0005925 | IDA | focal adhesion |
GO:0006915 | TAS | apoptotic process |
GO:0006921 | TAS | cellular component disassembly involved in execution phase of apoptosis |
GO:0006928 | TAS | cellular component movement |
GO:0008022 | IPI | protein C-terminus binding |
GO:0010628 | IEA | positive regulation of gene expression |
GO:0010977 | IEA | negative regulation of neuron projection development |
GO:0014002 | IEA | astrocyte development |
GO:0016032 | IEA | viral process |
GO:0030049 | TAS | muscle filament sliding |
GO:0031252 | IEA | cell leading edge |
GO:0042802 | IPI | identical protein binding |
GO:0042995 | IEA | cell projection |
GO:0043005 | IEA | neuron projection |
GO:0045103 | IEA | intermediate filament-based process |
GO:0045109 | IEA | intermediate filament organization |
GO:0045111 | IDA | intermediate filament cytoskeleton |
GO:0060020 | IEA | Bergmann glial cell differentiation |
GO:0060395 | IEA | SMAD protein signal transduction |
GO:0070062 | IDA | extracellular vesicular exosome |
GO:0070307 | IEA | lens fiber cell development |
GO:0097110 | IPI | scaffold protein binding |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000028062 | Vim-001 | protein_coding | Mus_musculus | 0 | 2274 |
ENSMUST00000155605 | Vim-002 | retained_intron | Mus_musculus | 0 | 990 |
ENSMUST00000148248 | Vim-004 | retained_intron | Mus_musculus | 0 | 697 |
ENSMUST00000141365 | Vim-003 | protein_coding | Mus_musculus | 0 | 527 |
ENSMUST00000023797 | Krt4-201 | protein_coding | Mus_musculus | 0.00000000000005 | 84 |
ENSMUST00000023786 | Krt6b-201 | protein_coding | Mus_musculus | 0.000000000002 | 79 |
ENSMUST00000023788 | Krt6a-201 | protein_coding | Mus_musculus | 0.000000000002 | 79 |
ENSMUST00000042957 | Krt75-001 | protein_coding | Mus_musculus | 0.0000000001 | 73 |
ENSMUST00000100179 | Krt76-001 | protein_coding | Mus_musculus | 0.000000001 | 69 |
ENSMUST00000023712 | Krt2-001 | protein_coding | Mus_musculus | 0.000000005 | 68 |
ENSMUST00000023952 | Krt8-201 | protein_coding | Mus_musculus | 0.000000005 | 68 |
ENSMUST00000088049 | Krt86-201 | protein_coding | Mus_musculus | 0.00000006 | 64 |
ENSMUST00000081945 | Krt83-201 | protein_coding | Mus_musculus | 0.00000006 | 64 |
ENSMUST00000061185 | Krt81-201 | protein_coding | Mus_musculus | 0.00000006 | 64 |
ENSMUST00000023718 | 5430421N21Rik-001 | protein_coding | Mus_musculus | 0.00000006 | 64 |