C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075743-ENSDARG00000070824 CGP 7955 6:29111350-29123887
GeneTranscriptPositionBiotype
ENSDARG00000070824 (ndufb5)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex 5 		ENSDART00000104298 (ndufb5-001) 29116793-29123887 protein_coding
ENSDARG00000075743 (mrpl47)
mitochondrial ribosomal protein L47 		ENSDART00000115031 (mrpl47-001) 29111350-29116374 protein_coding
CIL_00049U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136522-ENSG00000136521 CGP 9606 3:179588285-179627647
GeneTranscriptPositionBiotype
ENSG00000136518 (ACTL6A)
actin-like 6A 		ENST00000392662 (ACTL6A-201) 179562920-179588398 protein_coding
ENST00000429709 (ACTL6A-001) 179562880-179588408 protein_coding
ENST00000450518 (ACTL6A-002) 179562886-179588407 protein_coding
ENST00000461125 (ACTL6A-016) 179586488-179588241 retained_intron
ENST00000467383 (ACTL6A-013) 179574353-179576275 retained_intron
ENST00000467615 (ACTL6A-014) 179575010-179581008 processed_transcript
ENST00000468767 (ACTL6A-007) 179562923-179575488 processed_transcript
ENST00000479056 (ACTL6A-015) 179576376-179580955 retained_intron
ENST00000484312 (ACTL6A-018) 179581164-179586708 retained_intron
ENST00000486471 (ACTL6A-012) 179573234-179575210 retained_intron
ENST00000487978 (ACTL6A-011) 179569815-179580701 nonsense_mediated_decay
ENST00000490364 (ACTL6A-009) 179562959-179570241 protein_coding
ENST00000491202 (ACTL6A-006) 179562923-179570391 retained_intron
ENST00000494843 (ACTL6A-008) 179562930-179574563 retained_intron
ENSG00000136521 (NDUFB5)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 		ENST00000259037 (NDUFB5-001) 179604702-179624497 protein_coding
ENST00000359944 (NDUFB5-003) 179604811-179624500 nonsense_mediated_decay
ENST00000468210 (NDUFB5-006) 179604809-179624376 nonsense_mediated_decay
ENST00000471112 (NDUFB5-016) 179616007-179624498 protein_coding
ENST00000472629 (NDUFB5-005) 179604801-179624235 protein_coding
ENST00000473500 (NDUFB5-012) 179604907-179624351 processed_transcript
ENST00000476587 (NDUFB5-011) 179616975-179624377 retained_intron
ENST00000477177 (NDUFB5-007) 179604816-179615408 retained_intron
ENST00000480374 (NDUFB5-009) 179604841-179624267 nonsense_mediated_decay
ENST00000482604 (NDUFB5-008) 179604826-179624091 protein_coding
ENST00000488002 (NDUFB5-004) 179604690-179617418 retained_intron
ENST00000491054 (NDUFB5-010) 179615206-179618522 retained_intron
ENST00000493716 (NDUFB5-014) 179618227-179624100 retained_intron
ENST00000493866 (NDUFB5-002) 179604791-179627647 protein_coding
ENST00000496904 (NDUFB5-013) 179604890-179618477 processed_transcript
ENST00000611971 (NDUFB5-201) 179604787-179624499 protein_coding
ENSG00000136522 (MRPL47)
mitochondrial ribosomal protein L47 		ENST00000259038 (MRPL47-002) 179588455-179604640 protein_coding
ENST00000392659 (MRPL47-003) 179588831-179604649 protein_coding
ENST00000476781 (MRPL47-001) 179588285-179604654 protein_coding
ENSG00000239096 (snoU13)
Small nucleolar RNA U13 		ENST00000459278 (snoU13.1-229) 179614775-179614878 snoRNA
CIL_00049U_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037531-ENSMUSG00000027673 CGP 10090 3:32725397-32751566
GeneTranscriptPositionBiotype
ENSMUSG00000027671 (Actl6a)
actin-like 6A 		ENSMUST00000029214 (Actl6a-001) 32708546-32726968 protein_coding
ENSMUST00000126144 (Actl6a-003) 32709164-32718656 protein_coding
ENSMUST00000135400 (Actl6a-004) 32711383-32712170 retained_intron
ENSMUST00000153779 (Actl6a-002) 32718567-32726968 retained_intron
ENSMUSG00000037531 (Mrpl47)
mitochondrial ribosomal protein L47 		ENSMUST00000043966 (Mrpl47-001) 32725397-32737147 protein_coding
ENSMUST00000153564 (Mrpl47-002) 32727575-32732613 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049U_0001ENSDARG00000070824ENSDART00000104298ENSDARG00000075743ENSDART00000115031CIL_00049U_0002ENSG00000136518ENST00000392662ENST00000429709ENST00000450518ENST00000461125ENST00000467383ENST00000467615ENST00000468767ENST00000479056ENST00000484312ENST00000486471ENST00000487978ENST00000490364ENST00000491202ENST00000494843ENSG00000136521ENST00000259037ENST00000359944ENST00000468210ENST00000471112ENST00000472629ENST00000473500ENST00000476587ENST00000477177ENST00000480374ENST00000482604ENST00000488002ENST00000491054ENST00000493716ENST00000493866ENST00000496904ENST00000611971ENSG00000136522ENST00000259038ENST00000392659ENST00000476781ENSG00000239096ENST00000459278CIL_00049U_0003ENSMUSG00000027671ENSMUST00000029214ENSMUST00000126144ENSMUST00000135400ENSMUST00000153779ENSMUSG00000037531ENSMUST00000043966ENSMUST00000153564
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049U_0001ENSDARG00000070824ENSDART00000104298ENSDARG00000075743ENSDART00000115031CIL_00049U_0002ENSG00000136518ENST00000392662ENST00000429709ENST00000450518ENST00000490364ENST00000491202ENSG00000136521ENST00000259037ENST00000359944ENST00000468210ENST00000472629ENST00000476587ENST00000480374ENST00000482604ENST00000493866ENST00000611971ENSG00000136522ENST00000259038ENST00000392659ENST00000476781ENSG00000239096ENST00000459278CIL_00049U_0003ENSMUSG00000027671ENSMUST00000029214ENSMUST00000126144ENSMUSG00000037531ENSMUST00000043966
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070824 ENSDART00000104298 N/A N/A N/A 63.951±27.02 N/A N/A 75.778±79.12 28.761±0.00 5.967±0.00 N/A 107.106±0.00 N/A N/A N/A
ENSDARG00000075743 ENSDART00000115031 N/A N/A N/A 10.927±3.98 N/A N/A 17.915±11.29 14.296±7.96 2.518±0.00 N/A 18.122±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136518 ENST00000392662 N/A 7.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429709 N/A N/A 0.989±0.00 N/A 1.506±0.00 6.191±0.00 N/A 1.625±0.00 2.379±0.00 3.176±1.99 2.839±0.00 16.951±1.40 9.680±1.00 12.244±0.00
ENST00000450518 7.139±0.00 3.941±0.00 1.764±0.00 1.919±0.08 5.415±0.10 10.231±0.00 2.585±1.20 8.934±0.00 2.538±1.10 2.441±0.43 1.957±0.07 7.264±0.00 N/A 17.935±0.00
ENST00000461125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490364 N/A N/A N/A N/A N/A N/A N/A 11.079±0.00 N/A N/A N/A N/A N/A N/A
ENST00000491202 N/A N/A 5.673±0.00 N/A 9.200±0.00 10.487±0.00 2.604±0.00 N/A 12.370±0.00 4.497±0.00 N/A 20.904±0.00 N/A N/A
ENST00000494843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136521 ENST00000259037 N/A N/A 4.953±0.00 11.646±0.00 8.763±0.00 6.789±0.00 31.089±10.50 14.465±0.19 11.454±4.80 7.961±1.85 8.463±5.32 25.969±13.33 35.271±6.01 26.590±1.92
ENST00000359944 N/A 7.134±0.00 N/A N/A 9.547±0.00 N/A N/A 13.093±0.00 N/A N/A 3.771±0.00 6.166±1.35 N/A N/A
ENST00000468210 11.605±0.00 7.676±0.00 N/A 27.479±0.00 25.372±0.00 26.953±0.00 N/A N/A N/A N/A 9.131±0.00 N/A 9.426±0.00 31.255±0.00
ENST00000471112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472629 10.824±0.00 7.403±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.387±0.00
ENST00000473500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476587 N/A N/A N/A N/A N/A N/A 19.246±0.00 35.104±0.00 12.401±0.00 8.674±0.00 12.217±0.00 31.879±0.00 30.283±0.00 29.622±0.00
ENST00000477177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480374 N/A N/A N/A N/A N/A 21.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482604 N/A N/A N/A N/A 21.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493866 1.668±0.00 1.787±0.00 0.825±0.00 7.700±0.00 2.405±1.37 0.544±0.00 3.134±0.57 1.760±0.00 1.089±0.00 0.722±0.00 1.634±0.00 0.865±0.00 N/A N/A
ENST00000496904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611971 11.943±0.00 N/A N/A 15.645±3.39 13.478±0.00 8.459±6.31 N/A 11.321±0.00 N/A N/A 7.827±0.85 N/A N/A N/A
ENSG00000136522 ENST00000259038 N/A N/A N/A 4.176±0.00 N/A N/A 3.858±0.00 N/A N/A N/A N/A 20.085±0.00 11.798±0.00 31.986±0.00
ENST00000392659 14.255±0.00 22.215±0.00 N/A 5.833±2.35 17.627±0.00 18.825±0.00 8.731±6.46 14.515±11.67 13.421±0.00 9.460±0.00 9.313±0.00 N/A 10.120±0.00 44.044±0.00
ENST00000476781 6.265±0.00 5.892±0.00 1.527±0.00 5.067±1.07 4.829±1.80 6.635±1.34 4.749±2.30 8.171±4.96 3.407±0.57 2.926±0.24 3.327±0.38 10.169±4.25 7.657±0.38 21.236±7.40
ENSG00000239096 ENST00000459278 N/A 0.215±0.00 N/A N/A 0.216±0.00 N/A N/A 1.048±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027671 ENSMUST00000029214 8.111±1.60 N/A N/A 10.608±0.00 N/A 10.438±0.00 N/A N/A 20.408±8.24 7.958±0.88 N/A 11.175±2.67 17.277±3.54 18.761±4.84
ENSMUST00000126144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.051±0.00 37.729±0.00 49.392±0.00
ENSMUST00000135400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037531 ENSMUST00000043966 N/A N/A 3.924±0.09 4.218±1.39 6.343±0.00 N/A N/A N/A 5.938±1.71 2.754±0.00 N/A 4.389±0.54 5.058±1.28 5.420±1.53
ENSMUST00000153564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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