C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472981 RP11-796G6.1-001 ENSG00000241494 9606 + 14:101677943-101678380 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000472981
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000472981 0.163±0.00 0.172±0.00 0.035±0.00 0.308±0.00 0.193±0.00 0.121±0.00 0.137±0.00 0.060±0.00 0.318±0.00 0.356±0.00 0.208±0.19 0.330±0.06 0.722±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A7 CIL_0004A7_0001 CGP 14:101561351-101927989

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118533 Gm15772-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000167436 Rpl26-201 protein_coding Mus_musculus 0 464
ENSMUST00000073471 Rpl26-001 protein_coding Mus_musculus 0 464
ENSMUST00000118781 Gm11826-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000183196 Gm10136-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000122220 Rpl26-ps5-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000085379 Rpl26-ps2-201 processed_pseudogene Mus_musculus 0 431
ENSMUST00000101014 Rpl26-002 protein_coding Mus_musculus 0 431
ENSMUST00000170279 Rpl26-ps4-201 processed_pseudogene Mus_musculus 0 425
ENSMUST00000118045 Gm15896-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000128952 Rpl26-003 protein_coding Mus_musculus 0 316
ENSMUST00000122414 Gm11506-001 processed_pseudogene Mus_musculus 0 287

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