C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004B1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113083-ENSG00000164185 CGP 9606 5:122063195-122179617
GeneTranscriptPositionBiotype
ENSG00000113083 (LOX)
lysyl oxidase 		ENST00000231004 (LOX-001) 122063195-122078285 protein_coding
ENST00000503759 (LOX-003) 122065945-122077223 retained_intron
ENST00000505593 (LOX-005) 122065944-122076083 processed_transcript
ENST00000508067 (LOX-006) 122070520-122077472 nonsense_mediated_decay
ENST00000513319 (LOX-002) 122065797-122077174 processed_transcript
ENSG00000151304 (SRFBP1)
serum response factor binding protein 1 		ENST00000339397 (SRFBP1-001) 121961961-122028619 protein_coding
ENST00000504881 (SRFBP1-002) 122020530-122075570 processed_transcript
ENSG00000164185 (ZNF474)
zinc finger protein 474 		ENST00000296600 (ZNF474-001) 122129513-122153571 protein_coding
ENST00000504912 (ZNF474-004) 122129560-122152179 protein_coding
ENST00000505843 (ZNF474-002) 122129566-122152099 protein_coding
ENST00000514925 (ZNF474-003) 122129622-122179617 processed_transcript
ENSG00000247311 (CTC-441N14.2)
 ENST00000504829 (CTC-441N14.2-001) 122128762-122154856 antisense
ENSG00000249610 (CTC-441N14.1)
 ENST00000505209 (CTC-441N14.1-001) 122154496-122156015 antisense
ENSG00000250803 (CTC-441N14.4)
 ENST00000509403 (CTC-441N14.4-002) 122160176-122182658 processed_transcript
ENST00000514637 (CTC-441N14.4-003) 122160191-122180061 processed_transcript
ENST00000514887 (CTC-441N14.4-001) 122179556-122182639 transcribed_processed_pseudogene
ENST00000515596 (CTC-441N14.4-004) 122157368-122163318 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0004B1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024529-ENSMUSG00000046886 CGP 10090 18:52516069-52639830
GeneTranscriptPositionBiotype
ENSMUSG00000024529 (Lox)
lysyl oxidase 		ENSMUST00000025409 (Lox-201) 52517238-52529708 protein_coding
ENSMUST00000171470 (Lox-202) 52516069-52529867 protein_coding
ENSMUSG00000046886 (Zfp474)
zinc finger protein 474 		ENSMUST00000072666 (Zfp474-201) 52615915-52639830 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004B1_0001ENSG00000113083ENST00000231004ENST00000503759ENST00000505593ENST00000508067ENST00000513319ENSG00000151304ENST00000339397ENST00000504881ENSG00000164185ENST00000296600ENST00000504912ENST00000505843ENST00000514925ENSG00000247311ENST00000504829ENSG00000249610ENST00000505209ENSG00000250803ENST00000509403ENST00000514637ENST00000514887ENST00000515596CIL_0004B1_0002ENSMUSG00000024529ENSMUST00000025409ENSMUST00000171470ENSMUSG00000046886ENSMUST00000072666
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004B1_0001ENSG00000113083ENST00000231004ENST00000503759ENSG00000151304ENST00000339397ENSG00000164185ENST00000296600ENST00000504912ENST00000514925ENSG00000247311ENST00000504829ENSG00000249610ENST00000505209ENSG00000250803ENST00000509403ENST00000514637ENST00000514887ENST00000515596CIL_0004B1_0002ENSMUSG00000024529ENSMUST00000025409ENSMUST00000171470ENSMUSG00000046886ENSMUST00000072666
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113083 ENST00000231004 15.429±0.00 1.061±0.00 N/A 0.609±0.00 15.581±0.00 6.569±0.00 1.385±0.00 3.536±0.00 0.528±0.32 4.677±3.98 0.321±0.00 1.850±1.55 1.781±0.55 1.535±1.14
ENST00000503759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.946±0.00 N/A
ENST00000505593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151304 ENST00000339397 N/A 1.139±0.00 1.577±0.00 1.030±0.02 2.996±0.00 2.345±0.31 1.320±0.13 1.546±0.10 1.931±0.91 1.982±0.00 1.000±0.63 1.825±0.90 0.961±0.15 1.069±0.35
ENST00000504881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164185 ENST00000296600 0.021±0.00 N/A N/A 0.107±0.00 0.056±0.03 0.077±0.00 0.019±0.00 N/A 0.012±0.00 0.346±0.00 0.072±0.00 0.239±0.31 0.072±0.05 1.729±0.52
ENST00000504912 N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A N/A 0.220±0.00 N/A 0.070±0.00 0.028±0.00 N/A
ENST00000505843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514925 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000247311 ENST00000504829 0.019±0.00 0.441±0.00 N/A 0.332±0.00 0.289±0.00 0.210±0.00 0.157±0.00 0.192±0.00 0.017±0.00 N/A N/A 0.047±0.00 0.142±0.00 0.364±0.07
ENSG00000249610 ENST00000505209 N/A N/A N/A 0.324±0.00 N/A N/A N/A N/A N/A 0.681±0.00 N/A 0.077±0.00 0.128±0.00 0.428±0.00
ENSG00000250803 ENST00000509403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.935±4.92
ENST00000514637 N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.232±0.00
ENST00000515596 N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024529 ENSMUST00000025409 26.955±5.98 6.732±1.05 2.560±0.38 1.321±1.38 21.342±10.84 5.577±1.23 1.166±0.42 2.643±1.06 0.360±0.30 24.982±8.98 N/A 26.646±12.14 1.524±0.99 0.321±0.20
ENSMUST00000171470 4.947±0.00 N/A 1.997±0.75 0.487±0.47 N/A 0.663±0.00 N/A 0.411±0.14 0.639±0.58 N/A 0.750±0.36 4.116±1.61 1.425±0.88 N/A
ENSMUSG00000046886 ENSMUST00000072666 N/A N/A N/A 0.045±0.03 N/A N/A 0.100±0.08 0.020±0.01 0.005±0.00 N/A N/A 1.597±1.04 0.004±0.00 28.636±15.44

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