C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006FY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032175-ENSDARG00000032951 CGP 7955 2:32371845-32456410
GeneTranscriptPositionBiotype
ENSDARG00000032175 (puf60a)
poly-U binding splicing factor a 		ENSDART00000056645 (puf60a-201) 32371846-32385839 protein_coding
ENSDART00000129931 (puf60a-002) 32383036-32389646 protein_coding
ENSDART00000131823 (puf60a-007) 32388025-32389642 retained_intron
ENSDART00000133311 (puf60a-003) 32383795-32389631 protein_coding
ENSDART00000133660 (puf60a-010) 32372434-32384049 protein_coding
ENSDART00000134539 (puf60a-006) 32383474-32389604 protein_coding
ENSDART00000137616 (puf60a-009) 32382999-32384090 processed_transcript
ENSDART00000138371 (puf60a-005) 32383795-32389605 protein_coding
ENSDART00000139179 (puf60a-011) 32383465-32389624 protein_coding
ENSDART00000144613 (puf60a-001) 32371845-32389729 protein_coding
ENSDART00000145718 (puf60a-008) 32385760-32389595 retained_intron
ENSDART00000145810 (puf60a-004) 32383037-32389624 protein_coding
ENSDARG00000032951 (nrbp2)
nuclear receptor binding protein 2 		ENSDART00000041146 (nrbp2-201) 32391243-32456001 protein_coding
ENSDART00000098854 (nrbp2-202) 32397724-32400436 protein_coding
ENSDART00000135293 (nrbp2-001) 32393877-32456410 protein_coding
ENSDART00000141456 (nrbp2-002) 32400076-32404283 processed_transcript
ENSDART00000147381 (nrbp2-003) 32397097-32400437 retained_intron
ENSDARG00000082493 (SNORA57)
Small nucleolar RNA SNORA57 		ENSDART00000118996 (SNORA57.1-201) 32384199-32384334 snoRNA

Danio rerio Ensembl (Zv9)

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CIL_0006FY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179950-ENSG00000185189 CGP 9606 8:143816344-143840974
GeneTranscriptPositionBiotype
ENSG00000179950 (PUF60)
poly-U binding splicing factor 60KDa 		ENST00000313352 (PUF60-004) 143816377-143829039 protein_coding
ENST00000349157 (PUF60-002) 143816377-143829352 protein_coding
ENST00000453551 (PUF60-003) 143816377-143829026 protein_coding
ENST00000456095 (PUF60-005) 143816377-143829303 protein_coding
ENST00000524570 (PUF60-010) 143817042-143823282 processed_transcript
ENST00000526151 (PUF60-016) 143821349-143829315 retained_intron
ENST00000526459 (PUF60-024) 143817578-143829338 protein_coding
ENST00000526683 (PUF60-001) 143816344-143829859 protein_coding
ENST00000527197 (PUF60-006) 143816520-143829320 protein_coding
ENST00000527584 (PUF60-019) 143818373-143824460 retained_intron
ENST00000527744 (PUF60-025) 143817586-143829299 protein_coding
ENST00000528320 (PUF60-018) 143817886-143824399 retained_intron
ENST00000528999 (PUF60-021) 143817979-143819037 processed_transcript
ENST00000529693 (PUF60-022) 143818193-143818963 retained_intron
ENST00000529999 (PUF60-012) 143817950-143829044 protein_coding
ENST00000531897 (PUF60-013) 143817996-143829304 protein_coding
ENST00000531951 (PUF60-014) 143817866-143829028 processed_transcript
ENST00000531995 (PUF60-020) 143820233-143821743 retained_intron
ENST00000532127 (PUF60-015) 143820426-143829319 retained_intron
ENST00000532884 (PUF60-023) 143817080-143818476 protein_coding
ENST00000533162 (PUF60-011) 143818222-143829338 protein_coding
ENST00000533362 (PUF60-017) 143821597-143825140 processed_transcript
ENSG00000185189 (NRBP2)
nuclear receptor binding protein 2 		ENST00000423469 (NRBP2-005) 143833742-143838074 retained_intron
ENST00000442628 (NRBP2-001) 143833721-143840974 protein_coding
ENST00000527545 (NRBP2-007) 143833747-143837150 retained_intron
ENST00000529747 (NRBP2-004) 143833600-143840029 retained_intron
ENST00000530123 (NRBP2-009) 143835018-143837132 protein_coding
ENST00000530347 (NRBP2-010) 143838679-143840630 protein_coding
ENST00000531729 (NRBP2-006) 143835662-143838062 retained_intron
ENST00000532940 (NRBP2-003) 143835530-143840213 retained_intron
ENST00000533093 (NRBP2-002) 143833594-143840951 retained_intron
ENST00000533846 (NRBP2-008) 143835530-143840213 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0006FY_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002524-ENSMUSG00000075590 CGP 10090 15:76070184-76090013
GeneTranscriptPositionBiotype
ENSMUSG00000002524 (Puf60)
poly-U binding splicing factor 60 		ENSMUST00000002599 (Puf60-201) 76070184-76080946 protein_coding
ENSMUST00000100527 (Puf60-202) 76070184-76080946 protein_coding
ENSMUSG00000075590 (Nrbp2)
nuclear receptor binding protein 2 		ENSMUST00000019516 (Nrbp2-201) 76085595-76090013 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FY_0001ENSDARG00000032175ENSDART00000056645ENSDART00000129931ENSDART00000131823ENSDART00000133311ENSDART00000133660ENSDART00000134539ENSDART00000137616ENSDART00000138371ENSDART00000139179ENSDART00000144613ENSDART00000145718ENSDART00000145810ENSDARG00000032951ENSDART00000041146ENSDART00000098854ENSDART00000135293ENSDART00000141456ENSDART00000147381ENSDARG00000082493ENSDART00000118996CIL_0006FY_0002ENSG00000179950ENST00000313352ENST00000349157ENST00000453551ENST00000456095ENST00000524570ENST00000526151ENST00000526459ENST00000526683ENST00000527197ENST00000527584ENST00000527744ENST00000528320ENST00000528999ENST00000529693ENST00000529999ENST00000531897ENST00000531951ENST00000531995ENST00000532127ENST00000532884ENST00000533162ENST00000533362ENSG00000185189ENST00000423469ENST00000442628ENST00000527545ENST00000529747ENST00000530123ENST00000530347ENST00000531729ENST00000532940ENST00000533093ENST00000533846CIL_0006FY_0003ENSMUSG00000002524ENSMUST00000002599ENSMUST00000100527ENSMUSG00000075590ENSMUST00000019516
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FY_0001ENSDARG00000032175ENSDART00000056645ENSDART00000131823ENSDART00000144613ENSDART00000145718ENSDARG00000032951ENSDART00000041146ENSDART00000098854ENSDART00000135293ENSDARG00000082493ENSDART00000118996CIL_0006FY_0002ENSG00000179950ENST00000313352ENST00000349157ENST00000453551ENST00000456095ENST00000526459ENST00000526683ENST00000527197ENST00000527584ENST00000527744ENST00000531951ENSG00000185189ENST00000423469ENST00000442628ENST00000527545ENST00000529747ENST00000530347ENST00000533093ENST00000533846CIL_0006FY_0003ENSMUSG00000002524ENSMUST00000002599ENSMUST00000100527ENSMUSG00000075590ENSMUST00000019516
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032175 ENSDART00000056645 N/A N/A N/A 19.018±1.39 N/A N/A 7.690±4.00 16.373±0.00 2.978±0.00 N/A 4.835±0.00 N/A N/A N/A
ENSDART00000129931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000131823 N/A N/A N/A 2.070±0.00 N/A N/A 5.007±0.89 3.826±0.13 N/A N/A N/A N/A N/A N/A
ENSDART00000133311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144613 N/A N/A N/A 5.653±1.66 N/A N/A 3.636±0.64 N/A N/A N/A 1.832±0.00 N/A N/A N/A
ENSDART00000145718 N/A N/A N/A 2.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000032951 ENSDART00000041146 N/A N/A N/A 7.109±4.36 N/A N/A 1.599±0.88 4.191±0.76 0.153±0.00 N/A N/A N/A N/A N/A
ENSDART00000098854 N/A N/A N/A N/A N/A N/A N/A N/A 0.382±0.00 N/A N/A N/A N/A N/A
ENSDART00000135293 N/A N/A N/A 6.302±0.00 N/A N/A N/A 3.310±0.00 0.131±0.00 N/A N/A N/A N/A N/A
ENSDART00000141456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000082493 ENSDART00000118996 N/A N/A N/A N/A N/A N/A N/A N/A 2.823±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179950 ENST00000313352 N/A N/A 0.899±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.982±0.00 N/A
ENST00000349157 24.113±0.00 28.093±0.00 N/A 17.248±10.96 12.415±11.04 16.790±15.71 3.927±2.21 15.997±14.83 7.097±4.00 15.067±12.26 14.758±0.00 24.492±15.56 29.063±21.38 40.426±0.00
ENST00000453551 N/A N/A N/A 3.236±0.00 N/A 1.998±0.00 N/A 3.116±0.00 2.649±0.00 N/A N/A 13.345±0.00 N/A N/A
ENST00000456095 20.489±0.00 32.888±0.00 N/A 18.164±15.22 22.708±0.00 9.331±0.00 17.938±0.00 24.742±0.00 16.479±0.00 7.043±5.94 20.404±0.00 17.753±2.65 22.175±16.42 24.492±10.70
ENST00000524570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526459 N/A N/A N/A N/A N/A 2.173±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526683 N/A N/A N/A N/A N/A N/A N/A 6.818±0.00 N/A 0.980±0.00 N/A N/A N/A N/A
ENST00000527197 N/A N/A 1.056±0.00 N/A 2.927±0.00 N/A 3.963±3.02 1.433±0.00 11.774±0.00 12.434±0.00 10.462±3.12 11.577±0.00 N/A 22.284±0.00
ENST00000527584 N/A N/A 1.719±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527744 N/A N/A N/A N/A 4.512±0.00 N/A N/A 2.704±0.00 N/A N/A N/A N/A N/A N/A
ENST00000528320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531951 N/A N/A N/A N/A 2.307±0.00 N/A 0.807±0.00 N/A N/A 2.188±0.00 N/A N/A N/A N/A
ENST00000531995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185189 ENST00000423469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.292±0.00 N/A N/A N/A
ENST00000442628 6.295±0.00 3.174±0.00 0.706±0.00 11.102±7.17 5.007±4.14 4.949±0.00 1.982±1.26 8.431±0.00 4.241±3.45 4.328±3.49 0.981±0.19 6.535±3.89 2.447±0.58 7.081±1.93
ENST00000527545 N/A N/A N/A 6.232±0.00 2.372±0.00 1.102±0.00 1.639±0.00 5.079±1.57 2.649±1.87 4.074±0.00 0.570±0.00 1.694±1.42 1.361±0.00 6.174±0.00
ENST00000529747 N/A N/A N/A N/A 1.027±0.00 N/A N/A N/A 0.343±0.00 0.606±0.00 N/A N/A 0.449±0.00 N/A
ENST00000530123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530347 N/A N/A N/A N/A N/A N/A N/A N/A 1.917±0.00 N/A N/A N/A N/A N/A
ENST00000531729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533093 N/A N/A N/A 2.571±0.00 0.447±0.00 N/A 0.133±0.00 N/A N/A N/A N/A 1.615±0.96 N/A N/A
ENST00000533846 N/A 4.116±0.00 N/A N/A 7.467±0.00 1.728±0.00 N/A N/A N/A N/A 0.497±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002524 ENSMUST00000002599 45.349±6.81 131.787±11.48 49.945±6.36 60.847±15.57 54.548±24.61 70.438±6.99 19.840±2.47 41.081±3.01 45.797±11.30 56.865±12.35 8.171±3.13 99.096±27.45 60.915±16.01 35.393±13.49
ENSMUST00000100527 21.360±1.57 51.342±5.57 14.589±1.14 39.359±8.33 29.259±2.87 25.625±3.75 15.702±2.29 22.405±1.93 14.452±3.03 28.281±3.02 11.415±2.99 36.566±13.35 28.338±1.13 30.684±13.43
ENSMUSG00000075590 ENSMUST00000019516 19.541±14.36 91.569±8.68 68.242±8.32 39.737±15.25 24.748±10.94 43.260±3.81 7.759±4.86 18.830±8.82 6.773±4.85 26.946±11.44 2.842±1.49 54.775±17.58 3.115±1.49 8.609±5.07

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