C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome c oxidase subunit VIc
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000517682 COX6C-005 ENSG00000164919 9606 - 8:99878149-99893681 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000517682
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000517682 29.336±0.00 55.493±0.00 29.183±0.00 193.626±36.26 60.370±11.41 152.409±52.28 153.811±60.63 133.157±23.37 78.454±23.11 53.482±30.51 157.465±124.84 147.813±89.09 123.296±16.91 68.323±29.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026G CIL_00026G_0001 CGP 8:98944403-99877580
CIL_0006JN CIL_0006JN_0001 CGP 8:99013266-99894062
CIL_0008YK CIL_0008YK_0001 VISTA 8:99368181-99969581
CIL_0006JM CIL_0006JM_0001 CGP 8:99873200-100131268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004129 IEA cytochrome-c oxidase activity
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006091 TAS generation of precursor metabolites and energy
GO:0016021 IEA integral component of membrane
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153512 Cox6c-004 protein_coding Mus_musculus 0 237
ENSMUST00000014457 Cox6c-001 protein_coding Mus_musculus 0 237
ENSMUST00000127999 Cox6c-002 retained_intron Mus_musculus 4.99983e-42 174
ENSMUST00000149263 Gm6265-001 processed_pseudogene Mus_musculus 3e-40 169
ENSMUST00000181423 Gm16399-001 processed_pseudogene Mus_musculus 5e-37 158

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