C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribosomal protein L19 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000579260  |
RPL19-002 |
ENSG00000108298 |
9606 | + |
17:39200342-39204711  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008SN | CIL_0008SN_0001 | VISTA | 17:39110111-39710718 |
| CIL_0000TJ | CIL_0000TJ_0002 | CGP | 17:39173456-39204727 |
| CIL_0006QM | CIL_0006QM_0001 | CGP | 17:39200283-39225872 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003735 | IEA | structural constituent of ribosome |
| GO:0005622 | IEA | intracellular |
| GO:0005730 | IDA | nucleolus |
| GO:0005737 | IDA | cytoplasm |
| GO:0005840 | IEA | ribosome |
| GO:0006412 | IEA | translation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000017548
|
Rpl19-001 | protein_coding | Mus_musculus | 0 | 846 |
|
ENSMUST00000092425
|
Rpl19-002 | protein_coding | Mus_musculus | 0 | 845 |
|
ENSMUST00000122422
|
Rpl19-ps11-001 | processed_pseudogene | Mus_musculus | 0 | 841 |
|
ENSMUST00000121059
|
Rpl19-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 817 |
|
ENSMUST00000121251
|
Rpl19-ps12-001 | processed_pseudogene | Mus_musculus | 0 | 758 |
|
ENSMUST00000159343
|
Gm16238-001 | processed_pseudogene | Mus_musculus | 0 | 741 |
|
ENSMUST00000167150
|
Rpl19-ps4-201 | processed_pseudogene | Mus_musculus | 0 | 645 |
|
ENSMUST00000121130
|
Gm15566-001 | processed_pseudogene | Mus_musculus | 0 | 632 |
|
ENSMUST00000117145
|
Gm13216-001 | processed_pseudogene | Mus_musculus | 0 | 558 |
|
ENSMUST00000134435
|
Rpl19-003 | retained_intron | Mus_musculus | 6e-40 | 169 |
