Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	ribosomal protein L19
ENST00000579374	RPL19-006	ENSG00000108298	9606	+	17:39200316-39204727	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000579374	438.141±0.00	769.403±0.00	49.184±0.00	112.794±37.21	225.870±86.09	411.873±314.11	145.809±98.61	333.879±181.39	272.145±140.00	643.556±561.00	453.437±368.67	1330.477±1055.11	1075.127±514.72	343.064±100.03

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0008SN	CIL_0008SN_0001	VISTA	17:39110111-39710718
CIL_0000TJ	CIL_0000TJ_0002	CGP	17:39173456-39204727
CIL_0006QM	CIL_0006QM_0001	CGP	17:39200283-39225872

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003735	IEA	structural constituent of ribosome
GO:0005622	IEA	intracellular
GO:0005730	IDA	nucleolus
GO:0005737	IDA	cytoplasm
GO:0005840	IEA	ribosome
GO:0006412	IEA	translation

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000017548	Rpl19-001	protein_coding	Mus_musculus	0	869
ENSMUST00000122422	Rpl19-ps11-001	processed_pseudogene	Mus_musculus	0	857
ENSMUST00000092425	Rpl19-002	protein_coding	Mus_musculus	0	845
ENSMUST00000121059	Rpl19-ps1-001	processed_pseudogene	Mus_musculus	0	798
ENSMUST00000121251	Rpl19-ps12-001	processed_pseudogene	Mus_musculus	0	739
ENSMUST00000159343	Gm16238-001	processed_pseudogene	Mus_musculus	0	723
ENSMUST00000167150	Rpl19-ps4-201	processed_pseudogene	Mus_musculus	0	645
ENSMUST00000121130	Gm15566-001	processed_pseudogene	Mus_musculus	0	614
ENSMUST00000117145	Gm13216-001	processed_pseudogene	Mus_musculus	0	558
ENSMUST00000134435	Rpl19-003	retained_intron	Mus_musculus	9.00054e-42	174

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