C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006S5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173581-ENSG00000063244 CGP 9606 19:55641062-55674715
GeneTranscriptPositionBiotype
ENSG00000063244 (U2AF2)
U2 small nuclear RNA auxiliary factor 2 		ENST00000308924 (U2AF2-002) 55655065-55674298 protein_coding
ENST00000450554 (U2AF2-001) 55654146-55674715 protein_coding
ENST00000587196 (U2AF2-003) 55655109-55661946 nonsense_mediated_decay
ENST00000587275 (U2AF2-009) 55662519-55664059 retained_intron
ENST00000588850 (U2AF2-010) 55655082-55661317 retained_intron
ENST00000590551 (U2AF2-008) 55662499-55674239 protein_coding
ENST00000592867 (U2AF2-005) 55659208-55660485 retained_intron
ENST00000592874 (U2AF2-007) 55660516-55668865 nonsense_mediated_decay
ENSG00000171425 (ZNF581)
zinc finger protein 581 		ENST00000270451 (ZNF581-001) 55643547-55645622 protein_coding
ENST00000585995 (ZNF581-004) 55641031-55644990 protein_coding
ENST00000587252 (ZNF581-002) 55635459-55645622 protein_coding
ENST00000588537 (ZNF581-003) 55643810-55645621 protein_coding
ENSG00000173581 (CCDC106)
coiled-coil domain containing 106 		ENST00000308964 (CCDC106-001) 55648035-55653161 protein_coding
ENST00000586790 (CCDC106-002) 55648143-55653161 protein_coding
ENST00000586864 (CCDC106-005) 55648905-55649655 retained_intron
ENST00000587213 (CCDC106-007) 55648058-55649290 protein_coding
ENST00000588740 (CCDC106-004) 55648233-55653161 protein_coding
ENST00000591241 (CCDC106-008) 55648919-55653033 protein_coding
ENST00000591578 (CCDC106-003) 55648233-55653161 protein_coding
ENST00000592996 (CCDC106-009) 55641062-55651487 protein_coding
ENST00000593069 (CCDC106-006) 55648014-55649309 protein_coding
ENSG00000213015 (ZNF580)
zinc finger protein 580 		ENST00000325333 (ZNF580-001) 55640896-55643469 protein_coding
ENST00000543039 (ZNF580-002) 55641763-55643469 protein_coding
ENST00000545125 (ZNF580-201) 55642097-55643469 protein_coding
ENST00000590190 (ZNF580-005) 55640985-55642574 protein_coding
ENST00000592461 (ZNF580-003) 55642097-55642821 protein_coding
ENST00000592881 (ZNF580-004) 55635016-55642818 protein_coding
ENSG00000267096 (CTD-2537I9.13)
 ENST00000592252 (CTD-2537I9.13-001) 55670632-55672069 sense_intronic
CIL_0006S5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035228-ENSMUSG00000030435 CGP 10090 7:5056152-5079945
GeneTranscriptPositionBiotype
ENSMUSG00000030435 (U2af2)
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 		ENSMUST00000005041 (U2af2-201) 5062143-5079945 protein_coding
ENSMUST00000165399 (U2af2-202) 5067228-5079932 protein_coding
ENSMUSG00000035228 (Ccdc106)
coiled-coil domain containing 106 		ENSMUST00000045543 (Ccdc106-001) 5057197-5060785 protein_coding
ENSMUST00000108571 (Ccdc106-002) 5056152-5060782 protein_coding
ENSMUST00000123956 (Ccdc106-006) 5056916-5057824 protein_coding
ENSMUST00000131368 (Ccdc106-005) 5056856-5058085 protein_coding
ENSMUST00000144802 (Ccdc106-004) 5056725-5058168 protein_coding
ENSMUST00000149912 (Ccdc106-003) 5056740-5060785 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S5_0001ENSG00000063244ENST00000308924ENST00000450554ENST00000587196ENST00000587275ENST00000588850ENST00000590551ENST00000592867ENST00000592874ENSG00000171425ENST00000270451ENST00000585995ENST00000587252ENST00000588537ENSG00000173581ENST00000308964ENST00000586790ENST00000586864ENST00000587213ENST00000588740ENST00000591241ENST00000591578ENST00000592996ENST00000593069ENSG00000213015ENST00000325333ENST00000543039ENST00000545125ENST00000590190ENST00000592461ENST00000592881ENSG00000267096ENST00000592252CIL_0006S5_0002ENSMUSG00000030435ENSMUST00000005041ENSMUST00000165399ENSMUSG00000035228ENSMUST00000045543ENSMUST00000108571ENSMUST00000123956ENSMUST00000131368ENSMUST00000144802ENSMUST00000149912
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S5_0001ENSG00000063244ENST00000308924ENST00000450554ENST00000590551ENSG00000171425ENST00000270451ENST00000585995ENST00000587252ENST00000588537ENSG00000173581ENST00000308964ENST00000586790ENST00000588740ENST00000591241ENST00000591578ENST00000592996ENST00000593069ENSG00000213015ENST00000325333ENST00000543039ENST00000545125ENSG00000267096ENST00000592252CIL_0006S5_0002ENSMUSG00000030435ENSMUST00000005041ENSMUST00000165399ENSMUSG00000035228ENSMUST00000045543ENSMUST00000108571ENSMUST00000123956ENSMUST00000149912
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000063244 ENST00000308924 12.619±0.00 23.232±0.00 N/A 8.734±0.00 7.833±5.68 N/A N/A N/A N/A 1.915±0.00 N/A 6.984±5.65 20.711±2.64 14.843±0.00
ENST00000450554 15.170±0.00 38.944±0.00 3.063±0.00 15.529±9.33 10.765±8.50 17.399±14.93 11.156±10.15 18.484±14.72 12.201±9.25 29.179±28.51 10.847±9.51 43.688±32.74 34.418±0.66 50.754±1.50
ENST00000587196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590551 N/A N/A 1.679±0.00 N/A 7.408±0.00 11.533±5.65 1.229±0.00 11.093±8.17 4.252±0.00 5.459±0.00 5.166±2.12 49.848±51.57 45.797±27.06 88.203±0.00
ENST00000592867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171425 ENST00000270451 7.092±0.00 20.022±0.00 N/A N/A N/A 14.792±0.00 N/A N/A 2.669±0.00 N/A 12.787±0.00 21.184±6.61 7.802±2.48 10.443±0.00
ENST00000585995 N/A N/A N/A 2.908±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587252 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.712±0.00 1.342±0.00 0.514±0.00 N/A N/A
ENST00000588537 8.479±0.00 N/A N/A N/A 5.253±3.34 6.350±5.42 2.758±2.52 N/A N/A 8.068±7.71 6.490±0.00 15.903±0.00 9.983±3.45 N/A
ENSG00000173581 ENST00000308964 N/A N/A N/A 6.266±4.70 N/A N/A 3.447±3.10 N/A 5.558±0.00 N/A N/A N/A 2.781±0.00 N/A
ENST00000586790 N/A N/A N/A 4.245±3.55 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.162±0.00
ENST00000586864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588740 N/A N/A N/A N/A N/A N/A N/A 0.770±0.00 1.524±0.00 N/A N/A 13.461±12.48 8.225±0.12 N/A
ENST00000591241 N/A N/A N/A 14.374±0.00 13.767±0.00 N/A N/A 18.120±0.00 4.186±0.00 0.404±0.00 N/A N/A N/A 33.250±0.00
ENST00000591578 N/A N/A 1.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592996 N/A N/A N/A N/A N/A N/A 0.674±0.00 N/A N/A N/A 1.813±0.00 N/A 5.600±0.00 N/A
ENST00000593069 N/A N/A N/A 3.796±0.00 N/A 2.651±0.00 N/A 4.047±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000213015 ENST00000325333 10.896±0.00 N/A N/A 12.764±0.00 14.395±0.00 21.720±0.00 11.183±0.00 22.021±0.00 5.309±0.00 45.600±0.00 12.729±0.00 N/A 11.223±3.00 N/A
ENST00000543039 4.460±0.00 15.329±0.00 0.330±0.00 N/A 5.154±0.00 N/A N/A 7.291±0.00 0.527±0.00 0.178±0.00 0.801±0.00 6.883±3.46 N/A 3.280±0.00
ENST00000545125 N/A N/A N/A N/A N/A 1.601±0.00 N/A N/A N/A N/A N/A 23.351±3.17 11.153±1.41 22.820±0.00
ENST00000590190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267096 ENST00000592252 0.160±0.00 2.049±0.00 N/A 0.234±0.14 0.561±0.14 0.162±0.00 0.222±0.09 0.387±0.31 0.136±0.00 0.088±0.00 0.365±0.00 0.335±0.30 0.081±0.02 0.372±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030435 ENSMUST00000005041 32.178±15.43 30.357±7.97 36.356±8.09 77.645±45.29 33.874±10.34 27.113±13.04 13.235±7.42 26.709±14.09 48.158±34.47 46.335±4.22 5.237±0.82 42.255±16.73 61.455±19.35 19.414±7.68
ENSMUST00000165399 N/A 13.080±0.00 N/A 41.666±0.00 18.984±7.01 20.024±0.06 10.164±0.00 15.058±0.42 15.860±7.41 20.655±0.43 N/A 30.033±9.96 39.297±24.14 11.505±2.30
ENSMUSG00000035228 ENSMUST00000045543 2.685±0.15 N/A 0.782±0.11 3.528±0.49 0.263±0.04 0.751±0.00 N/A 0.196±0.00 N/A N/A N/A 1.511±0.36 N/A 3.397±0.32
ENSMUST00000108571 1.769±0.97 1.958±0.00 3.371±0.24 10.445±4.53 0.993±0.14 1.239±0.71 0.220±0.10 0.756±0.38 0.300±0.15 0.477±0.17 N/A 2.167±1.27 0.469±0.24 1.713±0.38
ENSMUST00000123956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.754±0.00 0.815±0.00 N/A
ENSMUST00000131368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149912 1.474±0.80 0.333±0.00 1.321±0.04 3.430±1.63 0.212±0.05 0.296±0.04 0.089±0.03 0.256±0.12 0.168±0.11 0.153±0.02 0.762±0.18 1.277±0.62 0.202±0.11 1.890±0.28

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