C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007EA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167114-ENSG00000167118 CGP 9606 9:128340646-128392016
GeneTranscriptPositionBiotype
ENSG00000167114 (SLC27A4)
solute carrier family 27 (fatty acid transporter), member 4
ENST00000300456 (SLC27A4-001) 128340728-128361470 protein_coding
ENST00000372870 (SLC27A4-002) 128340646-128361217 protein_coding
ENSG00000167118 (URM1)
ubiquitin related modifier 1
ENST00000372847 (URM1-004) 128371371-128388411 protein_coding
ENST00000372850 (URM1-002) 128371361-128390734 protein_coding
ENST00000372853 (URM1-001) 128371319-128390734 protein_coding
ENST00000452446 (URM1-201) 128371381-128392016 protein_coding
ENST00000470840 (URM1-005) 128371361-128390090 nonsense_mediated_decay
ENST00000483206 (URM1-003) 128378067-128389869 processed_transcript
ENSG00000207955 (MIR219A2)
microRNA 219a-2
ENST00000608502 (MIR219A2-001) 128392007-128393510 lincRNA
ENSG00000223551 (TMSB4XP4)
thymosin beta 4, X-linked pseudogene 4
ENST00000323496 (TMSB4XP4-001) 128342153-128342770 processed_pseudogene
CIL_0007EA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059316-ENSMUSG00000069020 CGP 10090 2:29802634-29845002
GeneTranscriptPositionBiotype
ENSMUSG00000059316 (Slc27a4)
solute carrier family 27 (fatty acid transporter), member 4
ENSMUST00000080065 (Slc27a4-001) 29802634-29817522 protein_coding
ENSMUST00000136444 (Slc27a4-002) 29806998-29810903 processed_transcript
ENSMUSG00000069020 (Urm1)
ubiquitin related modifier 1 homolog (S. cerevisiae)
ENSMUST00000091142 (Urm1-001) 29827342-29845002 protein_coding
ENSMUST00000123021 (Urm1-006) 29841648-29844064 retained_intron
ENSMUST00000130542 (Urm1-005) 29827395-29833636 retained_intron
ENSMUST00000147325 (Urm1-003) 29827361-29843421 processed_transcript
ENSMUST00000149379 (Urm1-004) 29820075-29843145 processed_transcript
ENSMUST00000156944 (Urm1-002) 29827342-29843374 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EA_0001ENSG00000167114ENST00000300456ENST00000372870ENSG00000167118ENST00000372847ENST00000372850ENST00000372853ENST00000452446ENST00000470840ENST00000483206ENSG00000207955ENST00000608502ENSG00000223551ENST00000323496CIL_0007EA_0002ENSMUSG00000059316ENSMUST00000080065ENSMUST00000136444ENSMUSG00000069020ENSMUST00000091142ENSMUST00000123021ENSMUST00000130542ENSMUST00000147325ENSMUST00000149379ENSMUST00000156944
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EA_0001ENSG00000167114ENST00000300456ENST00000372870ENSG00000167118ENST00000372847ENST00000372853ENST00000452446ENST00000470840ENST00000483206ENSG00000207955ENST00000608502ENSG00000223551ENST00000323496CIL_0007EA_0002ENSMUSG00000059316ENSMUST00000080065ENSMUSG00000069020ENSMUST00000091142ENSMUST00000123021ENSMUST00000147325ENSMUST00000149379ENSMUST00000156944
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167114 ENST00000300456 5.612±0.00 4.170±0.00 1.672±0.00 5.094±2.48 3.892±3.31 3.320±0.60 2.234±2.06 9.571±8.74 9.704±0.00 2.279±1.57 4.678±4.22 6.712±2.73 7.073±2.00 15.389±1.21
ENST00000372870 2.338±0.00 7.540±0.00 N/A 4.739±0.00 3.241±2.99 5.753±0.00 2.219±0.00 12.958±0.00 8.106±0.00 N/A N/A 4.545±1.17 2.492±0.60 9.372±1.46
ENSG00000167118 ENST00000372847 N/A N/A N/A N/A N/A 0.734±0.00 0.349±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000372850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372853 25.856±0.00 40.781±0.00 1.647±0.00 12.628±8.79 18.742±17.12 14.816±13.41 4.941±3.46 5.609±3.88 3.743±1.68 2.368±0.00 8.596±1.57 22.769±12.21 35.260±4.55 30.817±4.13
ENST00000452446 N/A 3.038±0.00 N/A 0.715±0.00 N/A N/A N/A 1.854±0.00 N/A 0.195±0.00 N/A 1.274±0.88 N/A N/A
ENST00000470840 11.848±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.724±0.00 N/A N/A
ENST00000483206 N/A N/A N/A N/A 1.558±0.00 N/A N/A 0.898±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000207955 ENST00000608502 N/A N/A N/A 13.126±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223551 ENST00000323496 1.000±0.00 1.386±0.00 0.276±0.00 2.020±1.36 0.682±0.19 1.301±0.64 0.322±0.18 0.636±0.18 0.742±0.66 1.540±0.02 0.100±0.02 0.829±0.72 0.182±0.06 0.775±0.51
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000059316 ENSMUST00000080065 17.380±1.82 23.502±1.20 7.102±0.76 14.142±5.43 15.376±4.72 34.507±2.43 5.689±0.78 16.706±5.40 5.829±5.54 7.076±1.89 2.368±0.35 19.398±6.95 6.012±3.63 1.428±0.93
ENSMUST00000136444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000069020 ENSMUST00000091142 5.253±0.97 3.752±1.70 10.720±2.15 7.881±3.54 5.004±1.26 5.026±1.66 4.996±1.35 5.799±1.34 6.181±3.60 5.690±1.70 3.611±1.35 5.404±2.23 6.822±3.28 2.186±1.29
ENSMUST00000123021 2.313±0.49 2.311±0.33 2.120±0.68 2.127±1.02 2.312±0.27 2.056±0.60 1.216±0.13 1.506±0.25 1.770±0.64 1.760±0.23 N/A 2.945±1.09 2.429±0.61 0.662±0.54
ENSMUST00000130542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147325 N/A 6.252±0.83 5.245±0.00 N/A N/A 3.952±0.00 5.300±0.00 5.914±1.00 3.326±0.21 6.156±0.51 4.028±0.52 N/A 6.862±2.62 N/A
ENSMUST00000149379 N/A N/A N/A 9.304±0.00 N/A N/A N/A N/A N/A N/A N/A 11.340±0.00 12.362±2.53 N/A
ENSMUST00000156944 12.168±0.44 18.610±3.38 N/A 8.557±0.00 14.795±3.70 13.901±4.13 N/A 10.290±0.57 8.735±1.56 9.738±2.46 N/A 17.993±3.98 14.692±3.11 5.923±1.99

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