C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007SK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs638 VISTA 9606 3:157571437-158172574
GeneTranscriptPositionBiotype
ENSG00000174891 (RSRC1)
arginine/serine-rich coiled-coil 1 		ENST00000295930 (RSRC1-001) 158110052-158544835 protein_coding
ENST00000312179 (RSRC1-004) 158110106-158544793 protein_coding
ENST00000464171 (RSRC1-002) 158110089-158545730 protein_coding
ENST00000468344 (RSRC1-009) 158110149-158136898 processed_transcript
ENST00000471911 (RSRC1-005) 158110156-158469732 processed_transcript
ENST00000471994 (RSRC1-003) 158110068-158460962 protein_coding
ENST00000475278 (RSRC1-006) 158110107-158544525 protein_coding
ENST00000476899 (RSRC1-010) 158110402-158354908 protein_coding
ENST00000477788 (RSRC1-011) 158122154-158354951 nonsense_mediated_decay
ENST00000480119 (RSRC1-013) 158110129-158544443 nonsense_mediated_decay
ENST00000480820 (RSRC1-007) 158105855-158544522 protein_coding
ENST00000482822 (RSRC1-012) 158203072-158543687 protein_coding
ENST00000494002 (RSRC1-008) 158107789-158203245 protein_coding
ENST00000496268 (RSRC1-014) 158203138-158303575 processed_transcript
ENST00000611884 (RSRC1-201) 158110052-158544834 protein_coding
ENSG00000174899 (C3orf55)
PQ loop repeat containing 2-like 		ENST00000312275 (C3orf55-001) 157543246-157578885 protein_coding
ENST00000426338 (C3orf55-004) 157543444-157601082 protein_coding
ENST00000449199 (C3orf55-003) 157543397-157601233 protein_coding
ENST00000459838 (C3orf55-002) 157543377-157578754 protein_coding
ENST00000461040 (C3orf55-007) 157543390-157677749 protein_coding
ENST00000468043 (C3orf55-006) 157543344-157569912 protein_coding
ENST00000498159 (C3orf55-005) 157543340-157569836 processed_transcript
ENSG00000242536 (RP11-290K4.2)
 ENST00000488999 (RP11-290K4.2-002) 158016216-158088983 lincRNA
ENST00000498241 (RP11-290K4.2-001) 158016371-158088997 lincRNA
CIL_0007SK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs638 VISTA 10090 3:66400786-67001918
GeneTranscriptPositionBiotype
ENSMUSG00000027833 (Shox2)
short stature homeobox 2 		ENSMUST00000029422 (Shox2-001) 66972790-66981771 protein_coding
ENSMUST00000162060 (Shox2-004) 66972780-66978447 protein_coding
ENSMUST00000162098 (Shox2-002) 66971727-66981318 protein_coding
ENSMUST00000162439 (Shox2-003) 66973259-66981141 protein_coding
ENSMUSG00000034544 (Rsrc1)
arginine/serine-rich coiled-coil 1 		ENSMUST00000046542 (Rsrc1-005) 66985703-67358390 protein_coding
ENSMUST00000065047 (Rsrc1-004) 66985685-67353722 protein_coding
ENSMUST00000065074 (Rsrc1-002) 66985672-67358395 protein_coding
ENSMUST00000160504 (Rsrc1-008) 66985978-66994711 protein_coding
ENSMUST00000161726 (Rsrc1-007) 66985967-67358396 protein_coding
ENSMUST00000162036 (Rsrc1-001) 66981390-67356557 protein_coding
ENSMUST00000162362 (Rsrc1-009) 66985670-66996473 protein_coding
ENSMUST00000162620 (Rsrc1-003) 66985685-67085227 retained_intron
ENSMUST00000162693 (Rsrc1-006) 66985704-67356558 protein_coding
ENSMUST00000182708 (Rsrc1-010) 66990972-66994892 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007SK_0001ENSG00000174891ENST00000295930ENST00000312179ENST00000464171ENST00000468344ENST00000471911ENST00000471994ENST00000475278ENST00000476899ENST00000477788ENST00000480119ENST00000480820ENST00000482822ENST00000494002ENST00000496268ENST00000611884ENSG00000174899ENST00000312275ENST00000426338ENST00000449199ENST00000459838ENST00000461040ENST00000468043ENST00000498159ENSG00000242536ENST00000488999ENST00000498241CIL_0007SK_0002ENSMUSG00000027833ENSMUST00000029422ENSMUST00000162060ENSMUST00000162098ENSMUST00000162439ENSMUSG00000034544ENSMUST00000046542ENSMUST00000065047ENSMUST00000065074ENSMUST00000160504ENSMUST00000161726ENSMUST00000162036ENSMUST00000162362ENSMUST00000162620ENSMUST00000162693ENSMUST00000182708
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007SK_0001ENSG00000174891ENST00000295930ENST00000464171ENST00000471994ENST00000475278ENST00000480119ENST00000480820ENST00000482822ENST00000494002ENST00000611884ENSG00000174899ENST00000312275ENST00000426338ENST00000449199ENST00000459838ENST00000461040ENST00000468043ENST00000498159ENSG00000242536ENST00000488999ENST00000498241CIL_0007SK_0002ENSMUSG00000027833ENSMUST00000029422ENSMUST00000162060ENSMUST00000162098ENSMUST00000162439ENSMUSG00000034544ENSMUST00000046542ENSMUST00000065047ENSMUST00000065074ENSMUST00000161726ENSMUST00000162036ENSMUST00000162693ENSMUST00000182708
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000174891 ENST00000295930 N/A N/A N/A N/A N/A N/A N/A 0.808±0.00 2.411±0.00 N/A N/A N/A 3.265±0.00 N/A
ENST00000312179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464171 N/A 5.070±0.00 N/A 4.835±2.22 5.021±2.84 N/A 0.881±0.00 N/A 1.256±0.36 1.044±0.00 N/A 1.569±0.31 1.605±0.31 N/A
ENST00000468344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471994 N/A N/A 4.190±0.00 10.903±3.44 6.026±0.00 3.563±0.00 N/A 1.501±0.00 10.574±0.00 4.273±0.00 N/A 5.187±2.61 9.164±0.00 8.245±0.00
ENST00000475278 N/A N/A 1.308±0.00 N/A N/A N/A N/A N/A N/A 2.049±0.00 N/A 2.575±0.00 N/A N/A
ENST00000476899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480119 N/A N/A N/A N/A 2.119±0.00 N/A N/A N/A N/A N/A N/A N/A 0.708±0.00 3.435±0.00
ENST00000480820 5.354±0.00 N/A 1.341±0.00 N/A N/A 3.392±0.00 0.995±0.00 N/A N/A N/A N/A 4.868±3.96 1.001±0.02 N/A
ENST00000482822 N/A N/A N/A 9.727±0.00 N/A 2.181±0.00 N/A 0.921±0.00 2.996±0.00 2.029±0.00 2.366±0.00 N/A N/A N/A
ENST00000494002 N/A N/A N/A N/A 7.577±0.00 N/A N/A N/A 5.185±0.00 7.378±0.00 1.178±0.00 N/A N/A N/A
ENST00000496268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611884 N/A N/A N/A N/A N/A N/A N/A 2.272±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000174899 ENST00000312275 0.668±0.00 0.055±0.00 N/A 0.043±0.00 1.685±0.66 N/A 0.180±0.07 N/A 0.142±0.00 0.312±0.00 N/A 0.025±0.00 0.065±0.00 0.042±0.00
ENST00000426338 0.976±0.00 N/A N/A N/A 1.075±0.00 N/A 0.147±0.00 N/A N/A N/A 0.496±0.00 0.053±0.00 0.060±0.01 N/A
ENST00000449199 N/A N/A N/A 0.039±0.00 1.247±0.00 0.496±0.00 N/A 0.166±0.00 N/A 0.386±0.00 N/A 0.022±0.00 N/A N/A
ENST00000459838 1.018±0.00 0.057±0.00 0.504±0.00 N/A N/A 0.514±0.11 N/A 0.490±0.00 1.160±0.00 0.672±0.00 0.161±0.00 0.066±0.00 0.164±0.00 0.175±0.00
ENST00000461040 N/A N/A N/A 0.257±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.204±0.00 N/A
ENST00000468043 2.149±0.00 0.158±0.00 N/A N/A 3.374±0.00 1.191±0.00 0.260±0.01 0.402±0.00 0.629±0.00 0.602±0.00 0.645±0.00 0.063±0.00 0.168±0.01 0.212±0.07
ENST00000498159 N/A N/A N/A N/A N/A N/A N/A 0.326±0.00 0.025±0.00 N/A N/A 0.090±0.00 0.223±0.09 N/A
ENSG00000242536 ENST00000488999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.306±0.00
ENST00000498241 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.426±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027833 ENSMUST00000029422 N/A 0.315±0.05 N/A 5.425±0.73 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162060 N/A 0.480±0.15 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.284±0.00 N/A N/A
ENSMUST00000162098 N/A N/A N/A 9.536±5.21 2.303±0.88 N/A 0.432±0.15 N/A N/A N/A N/A 0.471±0.00 N/A N/A
ENSMUST00000162439 N/A 0.934±0.11 N/A N/A 5.473±0.86 N/A 0.619±0.00 N/A N/A N/A N/A 0.300±0.00 N/A N/A
ENSMUSG00000034544 ENSMUST00000046542 N/A 0.712±0.00 N/A 4.364±0.00 2.104±0.00 N/A N/A 0.684±0.00 0.277±0.05 N/A N/A 1.663±0.00 1.935±0.00 N/A
ENSMUST00000065047 0.600±0.00 N/A N/A N/A N/A N/A 0.218±0.00 N/A N/A 0.728±0.00 N/A 0.655±0.26 N/A N/A
ENSMUST00000065074 1.939±0.46 N/A 4.650±0.78 4.832±2.60 0.967±0.00 0.952±0.56 0.761±0.18 1.661±0.56 1.826±1.08 1.497±0.59 3.940±0.56 4.048±3.81 3.708±1.17 3.116±0.34
ENSMUST00000160504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.267±0.56
ENSMUST00000162036 N/A N/A N/A 38.979±0.00 N/A N/A N/A N/A N/A N/A N/A 43.896±0.00 21.297±18.22 144.251±0.00
ENSMUST00000162362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.582±0.00 N/A
ENSMUST00000182708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.951±0.26 N/A N/A

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