| Transcript ID | Brain | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENSMUST00000162036 | 38.979±0.00 | 43.896±0.00 | 21.297±18.22 | 144.251±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | arginine/serine-rich coiled-coil 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000162036  |
Rsrc1-001 |
ENSMUSG00000034544 |
10090 | + |
3:66981390-67356557  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007SK | CIL_0007SK_0002 | VISTA | 3:66400786-67001918 |
| CIL_0008TK | CIL_0008TK_0002 | VISTA | 3:66634735-67237240 |
| CIL_0007KJ | CIL_0007KJ_0002 | UCNEbase | 3:66683972-67341053 |
| CIL_00098J | CIL_00098J_0002 | VISTA | 3:66709377-67310623 |
| CIL_0007SC | CIL_0007SC_0002 | VISTA | 3:66736007-67337651 |
| CIL_0008QV | CIL_0008QV_0002 | VISTA | 3:66770295-67371594 |
| CIL_0008BN | CIL_0008BN_0002 | VISTA | 3:66846973-67447795 |
| CIL_00086V | CIL_00086V_0002 | VISTA | 3:66870618-67471970 |
| CIL_0008BM | CIL_0008BM_0002 | VISTA | 3:66890932-67492590 |
| CIL_0008KO | CIL_0008KO_0002 | VISTA | 3:66912683-67513884 |
| CIL_0004JW | CIL_0004JW_0003 | CGP | 3:66971727-67358396 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000380 | IDA | alternative mRNA splicing, via spliceosome |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0006468 | IDA | protein phosphorylation |
| GO:0006913 | IDA | nucleocytoplasmic transport |
| GO:0008380 | ISO | RNA splicing |
| GO:0016607 | IDA | nuclear speck |
| GO:0046677 | IDA | response to antibiotic |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000295930
|
RSRC1-001 | protein_coding | Homo_sapiens | 0 | 1149 |
|
ENST00000312179
|
RSRC1-004 | protein_coding | Homo_sapiens | 0 | 667 |
|
ENST00000389589
|
SHOX2-001 | protein_coding | Homo_sapiens | 0 | 230 |
|
ENST00000441443
|
SHOX2-002 | protein_coding | Homo_sapiens | 0 | 230 |
|
ENST00000464171
|
RSRC1-002 | protein_coding | Homo_sapiens | 0 | 667 |
|
ENST00000471911
|
RSRC1-005 | processed_transcript | Homo_sapiens | 0 | 228 |
|
ENST00000471994
|
RSRC1-003 | protein_coding | Homo_sapiens | 0 | 656 |
|
ENST00000475278
|
RSRC1-006 | protein_coding | Homo_sapiens | 0 | 880 |
|
ENST00000476899
|
RSRC1-010 | protein_coding | Homo_sapiens | 0 | 610 |
|
ENST00000477788
|
RSRC1-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 291 |
|
ENST00000480119
|
RSRC1-013 | nonsense_mediated_decay | Homo_sapiens | 0 | 665 |
|
ENST00000480820
|
RSRC1-007 | protein_coding | Homo_sapiens | 0 | 1380 |
|
ENST00000482822
|
RSRC1-012 | protein_coding | Homo_sapiens | 0 | 701 |
|
ENST00000483851
|
SHOX2-003 | protein_coding | Homo_sapiens | 0 | 230 |
|
ENST00000496268
|
RSRC1-014 | processed_transcript | Homo_sapiens | 2e-34 | 150 |
|
ENST00000611884
|
RSRC1-201 | protein_coding | Homo_sapiens | 0 | 1149 |
