C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007WQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs350 VISTA 9606 14:35812479-36414628
GeneTranscriptPositionBiotype
ENSG00000100916 (BRMS1L)
breast cancer metastasis-suppressor 1-like 		ENST00000216807 (BRMS1L-001) 35826318-35871963 protein_coding
ENST00000547420 (BRMS1L-004) 35826446-35858681 nonsense_mediated_decay
ENST00000548758 (BRMS1L-003) 35826457-35866051 retained_intron
ENST00000551774 (BRMS1L-006) 35833001-35932325 protein_coding
ENST00000552677 (BRMS1L-002) 35826441-35870860 nonsense_mediated_decay
ENST00000552849 (BRMS1L-005) 35867777-35870393 retained_intron
ENSG00000151332 (MBIP)
MAP3K12 binding inhibitory protein 1 		ENST00000318473 (MBIP-004) 36298568-36320627 protein_coding
ENST00000359527 (MBIP-003) 36298590-36320607 protein_coding
ENST00000416007 (MBIP-001) 36298558-36320676 protein_coding
ENST00000603139 (MBIP-006) 36311577-36320624 protein_coding
ENST00000603913 (MBIP-009) 36311573-36314313 processed_transcript
ENST00000604154 (MBIP-012) 36299117-36301020 processed_transcript
ENST00000604160 (MBIP-005) 36314701-36319870 protein_coding
ENST00000604336 (MBIP-008) 36308157-36320597 protein_coding
ENST00000604768 (MBIP-011) 36299118-36311590 processed_transcript
ENST00000605579 (MBIP-010) 36308017-36320577 protein_coding
ENST00000621657 (MBIP-201) 36298565-36320624 protein_coding
ENSG00000252312 (RN7SKP21)
RNA, 7SK small nuclear pseudogene 21 		ENST00000516503 (RN7SKP21-201) 36231555-36231774 misc_RNA
ENSG00000257272 (RP11-317N8.3)
 ENST00000553046 (RP11-317N8.3-001) 35873857-35875303 lincRNA
ENSG00000257307 (RP11-317N8.4)
 ENST00000550416 (RP11-317N8.4-001) 35881001-35881709 processed_pseudogene
ENSG00000257585 (LINC00609)
long intergenic non-protein coding RNA 609 		ENST00000546508 (LINC00609-001) 36070427-36165288 lincRNA
ENSG00000257614 (RP11-116N8.2)
 ENST00000548199 (RP11-116N8.2-001) 35947556-35950044 lincRNA
ENSG00000257720 (ILF2P2)
interleukin enhancer binding factor 2 pseudogene 2 		ENST00000547482 (ILF2P2-001) 36054197-36055313 processed_pseudogene
ENSG00000257826 (RP11-116N8.4)
 ENST00000546376 (RP11-116N8.4-001) 36061026-36067190 lincRNA
ENSG00000258342 (RP11-116N8.1)
 ENST00000550089 (RP11-116N8.1-001) 35897982-36063743 sense_overlapping
ENSG00000258844 (RP11-259K15.2)
 ENST00000556542 (RP11-259K15.2-001) 36214607-36235608 lincRNA
ENSG00000258938 (RP11-317N8.5)
 ENST00000555918 (RP11-317N8.5-001) 35819224-35826765 antisense
ENSG00000259104 (PTCSC3)
papillary thyroid carcinoma susceptibility candidate 3 (non-protein coding) 		ENST00000556013 (PTCSC3-001) 36136108-36176468 lincRNA
CIL_0007WQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs350 VISTA 10090 12:55814128-56416274
GeneTranscriptPositionBiotype
ENSMUSG00000012076 (Brms1l)
breast cancer metastasis-suppressor 1-like 		ENSMUST00000059250 (Brms1l-201) 55836366-55869735 protein_coding
ENSMUSG00000021027 (Ralgapa1)
Ral GTPase activating protein, alpha subunit 1 		ENSMUST00000085385 (Ralgapa1-201) 55602929-55821167 protein_coding
ENSMUST00000110687 (Ralgapa1-202) 55602929-55821167 protein_coding
ENSMUSG00000021028 (Mbip)
MAP3K12 binding inhibitory protein 1 		ENSMUST00000021416 (Mbip-201) 56328306-56345894 protein_coding
ENSMUSG00000046747 (Gm9812)
predicted gene 9812 		ENSMUST00000061934 (Gm9812-201) 55820611-55821580 pseudogene
ENSMUSG00000066491 (Gm6265)
predicted pseudogene 6265 		ENSMUST00000149263 (Gm6265-001) 56373593-56373823 processed_pseudogene
ENSMUSG00000088389 (Gm24685)
predicted gene, 24685 		ENSMUST00000157764 (Gm24685-201) 56266920-56267204 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007WQ_0001ENSG00000100916ENST00000216807ENST00000547420ENST00000548758ENST00000551774ENST00000552677ENST00000552849ENSG00000151332ENST00000318473ENST00000359527ENST00000416007ENST00000603139ENST00000603913ENST00000604154ENST00000604160ENST00000604336ENST00000604768ENST00000605579ENST00000621657ENSG00000252312ENST00000516503ENSG00000257272ENST00000553046ENSG00000257307ENST00000550416ENSG00000257585ENST00000546508ENSG00000257614ENST00000548199ENSG00000257720ENST00000547482ENSG00000257826ENST00000546376ENSG00000258342ENST00000550089ENSG00000258844ENST00000556542ENSG00000258938ENST00000555918ENSG00000259104ENST00000556013CIL_0007WQ_0002ENSMUSG00000012076ENSMUST00000059250ENSMUSG00000021027ENSMUST00000085385ENSMUST00000110687ENSMUSG00000021028ENSMUST00000021416ENSMUSG00000046747ENSMUST00000061934ENSMUSG00000066491ENSMUST00000149263ENSMUSG00000088389ENSMUST00000157764
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007WQ_0001ENSG00000100916ENST00000216807ENST00000548758ENST00000551774ENST00000552677ENSG00000151332ENST00000318473ENST00000359527ENST00000416007ENST00000604160ENST00000604336ENST00000605579ENSG00000252312ENST00000516503ENSG00000257272ENST00000553046ENSG00000257307ENST00000550416ENSG00000257585ENST00000546508ENSG00000257614ENST00000548199ENSG00000257720ENST00000547482ENSG00000257826ENST00000546376ENSG00000258342ENST00000550089ENSG00000258844ENST00000556542ENSG00000258938ENST00000555918ENSG00000259104ENST00000556013CIL_0007WQ_0002ENSMUSG00000012076ENSMUST00000059250ENSMUSG00000021027ENSMUST00000085385ENSMUST00000110687ENSMUSG00000021028ENSMUST00000021416ENSMUSG00000046747ENSMUST00000061934ENSMUSG00000066491ENSMUST00000149263ENSMUSG00000088389ENSMUST00000157764
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100916 ENST00000216807 1.501±0.00 2.693±0.00 0.856±0.00 4.849±1.27 2.326±0.00 1.736±1.04 2.604±2.03 2.247±1.55 1.446±0.34 1.021±0.66 1.309±1.22 2.842±0.57 2.157±0.54 3.332±1.83
ENST00000547420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548758 N/A N/A 0.448±0.00 N/A N/A 0.636±0.00 N/A N/A 1.091±0.00 0.576±0.00 0.656±0.00 N/A N/A 1.994±0.00
ENST00000551774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.416±0.00 4.668±0.00
ENST00000552677 N/A N/A N/A N/A 0.519±0.00 N/A 0.361±0.00 N/A N/A N/A N/A 1.760±0.00 N/A 1.598±0.00
ENST00000552849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151332 ENST00000318473 N/A N/A N/A 2.386±1.33 2.362±0.08 2.194±0.00 0.571±0.18 2.351±0.40 1.689±0.22 3.247±0.00 N/A 1.477±0.00 0.550±0.06 1.267±0.00
ENST00000359527 N/A N/A N/A N/A N/A N/A N/A 1.367±0.00 N/A 2.417±0.00 N/A N/A 0.521±0.02 1.173±0.00
ENST00000416007 3.225±0.00 3.981±0.00 N/A 1.972±0.68 1.607±0.00 1.960±0.72 0.769±0.00 3.939±0.00 2.453±0.00 4.446±1.20 0.967±0.00 6.226±4.12 2.637±0.08 5.437±0.00
ENST00000603139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604160 N/A N/A N/A N/A 4.038±0.00 N/A 0.454±0.00 N/A 2.383±0.00 N/A 0.966±0.00 N/A N/A N/A
ENST00000604336 N/A N/A N/A 2.275±0.00 N/A N/A N/A N/A N/A N/A N/A 12.182±0.00 7.083±0.00 6.007±2.98
ENST00000604768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605579 N/A N/A 0.517±0.00 1.425±0.00 1.706±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252312 ENST00000516503 N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257272 ENST00000553046 0.051±0.00 0.048±0.00 N/A 0.278±0.01 N/A 0.082±0.01 0.061±0.00 N/A 0.321±0.28 0.531±0.00 N/A 0.105±0.00 0.113±0.00 0.057±0.00
ENSG00000257307 ENST00000550416 0.049±0.00 0.053±0.00 N/A 0.366±0.34 0.072±0.02 N/A 0.104±0.00 N/A 0.023±0.00 0.123±0.00 0.072±0.03 0.034±0.00 N/A 0.096±0.00
ENSG00000257585 ENST00000546508 N/A N/A N/A 0.809±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.00
ENSG00000257614 ENST00000548199 0.135±0.00 0.330±0.00 N/A 0.169±0.07 0.102±0.00 0.096±0.00 0.222±0.00 0.053±0.00 0.077±0.00 0.102±0.00 N/A 0.051±0.02 N/A 0.067±0.00
ENSG00000257720 ENST00000547482 N/A N/A N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257826 ENST00000546376 N/A N/A N/A 0.384±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.03 0.059±0.00
ENSG00000258342 ENST00000550089 N/A N/A N/A 3.809±2.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258844 ENST00000556542 N/A 0.029±0.00 N/A 1.025±0.60 N/A 0.013±0.00 0.026±0.00 0.058±0.00 N/A 0.112±0.00 0.104±0.00 0.120±0.01 N/A 0.655±0.34
ENSG00000258938 ENST00000555918 N/A N/A 0.524±0.00 N/A N/A 1.273±0.00 N/A 0.284±0.00 N/A 0.534±0.00 N/A N/A N/A N/A
ENSG00000259104 ENST00000556013 0.100±0.00 0.341±0.00 0.653±0.00 0.504±0.13 0.389±0.12 0.123±0.00 0.164±0.00 0.710±0.00 0.163±0.00 0.693±0.00 N/A 0.737±0.75 0.121±0.00 0.978±0.57
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000012076 ENSMUST00000059250 9.732±2.33 8.471±0.81 14.382±1.72 21.292±3.60 8.073±2.00 3.602±1.35 7.577±0.58 6.597±1.29 5.521±4.56 11.159±2.22 4.569±0.98 12.703±3.97 17.644±3.34 6.931±1.64
ENSMUSG00000021027 ENSMUST00000085385 4.656±0.63 3.184±0.33 3.707±0.49 4.730±0.00 3.381±0.70 1.568±0.69 1.769±0.31 2.040±0.70 1.301±1.08 1.541±0.38 1.373±0.75 4.814±1.94 2.159±0.91 4.211±0.96
ENSMUST00000110687 N/A N/A N/A 5.699±0.00 N/A 0.573±0.00 N/A 0.716±0.13 N/A N/A N/A N/A 0.493±0.00 N/A
ENSMUSG00000021028 ENSMUST00000021416 3.879±1.77 3.362±0.40 7.550±0.90 8.170±3.90 3.437±0.68 3.194±0.63 2.423±0.28 2.764±0.80 3.228±2.09 14.002±5.21 2.016±0.44 4.393±1.33 5.961±1.25 2.648±0.94
ENSMUSG00000046747 ENSMUST00000061934 N/A 4.092±1.02 N/A N/A 2.529±0.71 3.818±0.42 N/A N/A N/A 3.051±0.00 N/A 6.370±1.17 N/A 7.057±0.00
ENSMUSG00000066491 ENSMUST00000149263 N/A N/A 3.524±3.34 1.121±0.00 0.730±0.00 N/A 0.594±0.10 0.667±0.00 2.006±0.75 N/A 0.521±0.00 N/A 0.228±0.00 N/A
ENSMUSG00000088389 ENSMUST00000157764 N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A 0.942±0.36 N/A N/A N/A 1.553±0.00

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