C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008CH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1361 VISTA 9606 4:152066503-152669365
GeneTranscriptPositionBiotype
ENSG00000109670 (FBXW7)
F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 		ENST00000263981 (FBXW7-005) 152321263-152352971 protein_coding
ENST00000281708 (FBXW7-001) 152321259-152536101 protein_coding
ENST00000296555 (FBXW7-003) 152321259-152382515 protein_coding
ENST00000393956 (FBXW7-007) 152322819-152348806 protein_coding
ENST00000603548 (FBXW7-002) 152322623-152535001 protein_coding
ENST00000603821 (FBXW7-008) 152322819-152329073 retained_intron
ENST00000603841 (FBXW7-012) 152322819-152411878 protein_coding
ENST00000604069 (FBXW7-010) 152326222-152332767 retained_intron
ENST00000604095 (FBXW7-014) 152530273-152535210 processed_transcript
ENST00000604316 (FBXW7-011) 152322875-152324436 retained_intron
ENST00000604822 (FBXW7-009) 152346812-152352696 retained_intron
ENST00000604872 (FBXW7-004) 152411160-152535240 protein_coding
ENST00000605042 (FBXW7-013) 152411329-152412606 protein_coding
ENSG00000170006 (TMEM154)
transmembrane protein 154 		ENST00000304385 (TMEM154-001) 152618632-152680165 protein_coding
ENST00000504064 (TMEM154-003) 152646558-152680012 protein_coding
ENST00000510252 (TMEM154-004) 152628249-152641425 retained_intron
ENST00000613578 (TMEM154-201) 152639773-152652928 protein_coding
ENSG00000240669 (RP11-555K12.2)
 ENST00000496058 (RP11-555K12.2-001) 152613875-152614333 processed_pseudogene
ENSG00000243417 (RP11-555K12.1)
 ENST00000493479 (RP11-555K12.1-001) 152551277-152552364 processed_pseudogene
ENSG00000244544 (RN7SL446P)
RNA, 7SL, cytoplasmic 446, pseudogene 		ENST00000476053 (RN7SL446P-201) 152264150-152264445 misc_RNA
ENSG00000245954 (RP11-18H21.1)
 ENST00000499452 (RP11-18H21.1-001) 152100818-152104720 lincRNA
ENST00000504144 (RP11-18H21.1-003) 152100760-152101935 lincRNA
ENST00000509332 (RP11-18H21.1-002) 152100754-152104232 lincRNA
ENSG00000248571 (RP11-768B22.2)
 ENST00000515789 (RP11-768B22.2-001) 152666368-152670107 antisense
ENSG00000250706 (RP11-18H21.2)
 ENST00000504799 (RP11-18H21.2-001) 152146385-152178573 lincRNA
ENSG00000251377 (RP11-18H21.3)
 ENST00000504785 (RP11-18H21.3-002) 152222468-152225399 lincRNA
ENST00000504957 (RP11-18H21.3-001) 152207421-152225870 lincRNA
ENSG00000268471 (MIR4453)
microRNA 4453 		ENST00000604157 (MIR4453-001) 152536264-152539263 lincRNA
ENSG00000270750 (RP11-461L13.3)
 ENST00000603766 (RP11-461L13.3-001) 152320544-152321044 lincRNA
ENSG00000270883 (RP11-461L13.5)
 ENST00000605407 (RP11-461L13.5-001) 152317902-152318364 lincRNA
CIL_0008CH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1361 VISTA 10090 3:84637097-85239573
GeneTranscriptPositionBiotype
ENSMUSG00000028086 (Fbxw7)
F-box and WD-40 domain protein 7 		ENSMUST00000029727 (Fbxw7-002) 84952146-84977645 protein_coding
ENSMUST00000107675 (Fbxw7-005) 84925480-84979197 protein_coding
ENSMUST00000107678 (Fbxw7-003) 84864145-84979198 protein_coding
ENSMUST00000107679 (Fbxw7-001) 84815268-84979198 protein_coding
ENSMUST00000151410 (Fbxw7-004) 84815478-84977682 retained_intron
ENSMUSG00000056498 (Tmem154)
transmembrane protein 154 		ENSMUST00000107682 (Tmem154-001) 84666192-84704575 protein_coding
ENSMUST00000128344 (Tmem154-004) 84690223-84692544 retained_intron
ENSMUST00000129417 (Tmem154-003) 84666370-84685555 processed_transcript
ENSMUST00000134890 (Tmem154-002) 84666210-84685665 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CH_0001ENSG00000109670ENST00000263981ENST00000281708ENST00000296555ENST00000393956ENST00000603548ENST00000603821ENST00000603841ENST00000604069ENST00000604095ENST00000604316ENST00000604822ENST00000604872ENST00000605042ENSG00000170006ENST00000304385ENST00000504064ENST00000510252ENST00000613578ENSG00000240669ENST00000496058ENSG00000243417ENST00000493479ENSG00000244544ENST00000476053ENSG00000245954ENST00000499452ENST00000504144ENST00000509332ENSG00000248571ENST00000515789ENSG00000250706ENST00000504799ENSG00000251377ENST00000504785ENST00000504957ENSG00000268471ENST00000604157ENSG00000270750ENST00000603766ENSG00000270883ENST00000605407CIL_0008CH_0002ENSMUSG00000028086ENSMUST00000029727ENSMUST00000107675ENSMUST00000107678ENSMUST00000107679ENSMUST00000151410ENSMUSG00000056498ENSMUST00000107682ENSMUST00000128344ENSMUST00000129417ENSMUST00000134890
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CH_0001ENSG00000109670ENST00000263981ENST00000281708ENST00000296555ENST00000603548ENST00000603821ENST00000603841ENST00000604069ENST00000605042ENSG00000170006ENST00000304385ENST00000613578ENSG00000240669ENST00000496058ENSG00000243417ENST00000493479ENSG00000244544ENST00000476053ENSG00000245954ENST00000499452ENST00000504144ENST00000509332ENSG00000248571ENST00000515789ENSG00000250706ENST00000504799ENSG00000251377ENST00000504785ENST00000504957ENSG00000268471ENST00000604157ENSG00000270750ENST00000603766ENSG00000270883ENST00000605407CIL_0008CH_0002ENSMUSG00000028086ENSMUST00000029727ENSMUST00000107675ENSMUST00000107678ENSMUST00000107679ENSMUSG00000056498ENSMUST00000107682ENSMUST00000128344ENSMUST00000134890
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109670 ENST00000263981 N/A N/A N/A 31.272±3.27 3.347±0.00 N/A N/A 1.356±0.00 N/A N/A N/A N/A N/A N/A
ENST00000281708 3.753±0.00 4.996±0.00 0.913±0.00 N/A 4.090±1.01 1.391±0.22 1.260±0.00 2.500±0.00 1.191±0.44 3.651±0.00 0.935±0.00 1.679±0.64 1.053±0.00 9.915±0.00
ENST00000296555 N/A N/A N/A N/A N/A N/A 3.146±0.52 N/A N/A N/A 2.261±0.86 N/A N/A N/A
ENST00000393956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603548 N/A N/A N/A N/A N/A 0.967±0.00 N/A N/A N/A N/A N/A 2.305±0.76 2.758±0.00 9.445±0.00
ENST00000603821 N/A 0.860±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.767±0.00 0.491±0.00 N/A
ENST00000604069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.449±0.00 N/A N/A N/A
ENST00000604095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605042 N/A N/A 15.088±0.00 52.127±0.00 36.087±0.00 23.657±0.00 15.325±0.00 21.242±0.00 38.393±0.00 50.128±0.00 4.488±0.00 19.521±10.37 6.430±0.00 19.939±0.00
ENSG00000170006 ENST00000304385 0.437±0.00 N/A 0.057±0.00 0.099±0.04 0.267±0.00 0.150±0.00 0.159±0.04 0.149±0.02 0.623±0.42 0.672±0.17 0.007±0.00 0.868±0.62 0.473±0.11 0.067±0.04
ENST00000504064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613578 N/A N/A 0.381±0.00 0.487±0.00 2.472±0.00 1.563±0.00 N/A 1.459±0.00 7.859±0.00 5.682±0.00 N/A 8.555±4.36 1.971±0.00 N/A
ENSG00000240669 ENST00000496058 N/A N/A N/A 0.093±0.00 0.045±0.00 0.666±0.00 N/A 0.043±0.00 N/A N/A 0.036±0.00 N/A N/A 0.077±0.00
ENSG00000243417 ENST00000493479 0.014±0.00 0.184±0.00 N/A 0.081±0.00 0.370±0.00 0.152±0.13 0.025±0.00 0.055±0.00 0.025±0.00 0.127±0.00 0.049±0.00 0.033±0.01 0.096±0.04 0.062±0.00
ENSG00000244544 ENST00000476053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00
ENSG00000245954 ENST00000499452 0.018±0.00 0.642±0.00 N/A 0.012±0.00 0.078±0.00 N/A 0.018±0.00 N/A 0.043±0.02 0.574±0.00 N/A 0.045±0.02 N/A 0.021±0.00
ENST00000504144 N/A N/A N/A N/A N/A N/A N/A N/A 0.960±0.00 N/A N/A N/A N/A N/A
ENST00000509332 0.050±0.00 N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A 0.259±0.00 N/A 0.159±0.09 0.284±0.00 0.022±0.00
ENSG00000248571 ENST00000515789 N/A 0.137±0.00 N/A N/A 0.173±0.00 0.047±0.00 0.064±0.00 0.091±0.08 0.116±0.09 N/A N/A 0.089±0.08 0.011±0.00 0.004±0.00
ENSG00000250706 ENST00000504799 0.479±0.00 0.384±0.00 N/A 0.157±0.00 0.372±0.00 0.474±0.00 0.126±0.00 0.067±0.00 N/A N/A 0.040±0.00 0.100±0.07 0.034±0.00 N/A
ENSG00000251377 ENST00000504785 N/A 0.044±0.00 N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504957 N/A 0.032±0.00 N/A 0.200±0.00 N/A N/A N/A 0.288±0.00 N/A N/A N/A N/A N/A 0.241±0.00
ENSG00000268471 ENST00000604157 0.177±0.00 0.842±0.00 0.349±0.00 0.614±0.12 0.595±0.24 0.987±0.38 0.267±0.02 0.923±0.24 0.162±0.01 0.563±0.18 0.033±0.00 1.142±0.24 0.404±0.18 1.139±0.31
ENSG00000270750 ENST00000603766 N/A 0.147±0.00 N/A 1.277±0.56 0.083±0.06 0.094±0.00 0.039±0.00 0.081±0.00 0.269±0.22 1.619±0.00 1.252±0.88 0.298±0.30 0.230±0.00 0.295±0.22
ENSG00000270883 ENST00000605407 N/A N/A N/A 0.345±0.00 N/A N/A 0.075±0.00 0.026±0.00 N/A N/A N/A N/A N/A 0.094±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028086 ENSMUST00000029727 N/A N/A N/A 18.411±16.00 1.485±0.00 N/A N/A N/A N/A N/A N/A 3.268±0.82 N/A N/A
ENSMUST00000107675 0.744±0.23 N/A N/A N/A 1.216±0.57 1.961±0.50 11.165±1.62 0.956±0.33 0.793±0.35 2.141±0.29 4.691±0.68 3.096±0.61 N/A N/A
ENSMUST00000107678 0.402±0.00 N/A 1.381±0.09 2.788±0.60 1.076±0.00 0.933±0.00 N/A 0.587±0.26 0.602±0.21 N/A N/A 4.107±1.34 1.746±0.68 2.804±1.62
ENSMUST00000107679 1.531±0.25 N/A 2.624±0.04 3.700±2.08 1.459±0.00 N/A N/A 0.669±0.20 0.729±0.35 N/A 1.160±0.22 5.425±0.00 3.165±1.82 2.958±0.93
ENSMUST00000151410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000056498 ENSMUST00000107682 0.954±0.34 0.725±0.31 15.675±2.09 0.202±0.13 2.181±0.49 1.231±0.34 0.561±0.05 0.314±0.09 0.762±0.89 5.096±1.24 0.158±0.05 0.544±0.25 0.660±0.32 0.025±0.02
ENSMUST00000128344 N/A N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A 1.894±0.00 4.482±0.00 0.038±0.00
ENSMUST00000129417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134890 N/A N/A N/A N/A 0.854±0.00 0.274±0.00 N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A

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