C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11979
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119629 Gm11979-001 ENSMUSG00000082579 10090 - 11:6785838-6786580 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000119629
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000119629 0.078±0.04 0.111±0.00 0.129±0.06 0.081±0.02 0.292±0.14 0.109±0.00 0.100±0.03 0.122±0.08 0.060±0.04 0.068±0.01 0.277±0.18 0.060±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WT CIL_0008WT_0002 VISTA 11:6754211-7357799

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 544
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 549
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 597
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 638
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 643
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 638
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 638
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 638
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 538
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 638
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 638
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 638
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 608
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 614
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 305
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 741
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 719
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 514
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 669
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 496
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 544
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 449
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 741

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